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Lactobacillus salivarius UCC118 (lsal0)
Gene : glnH
DDBJ      :glnH         Glutamine-binding protein
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  681/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:276 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   45->261 2v25A PDBj 2e-30 36.2 %
:RPS:PDB   40->264 3delB PDBj 7e-40 23.3 %
:RPS:SCOP  38->272 1xt8A1  c.94.1.1 * 2e-42 29.7 %
:HMM:SCOP  4->264 2a5sA1 c.94.1.1 * 2.1e-65 41.9 %
:RPS:PFM   59->264 PF00497 * SBP_bac_3 9e-32 40.3 %
:HMM:PFM   43->264 PF00497 * SBP_bac_3 1.1e-59 43.5 216/225  
:BLT:SWISS 1->261 GLNH_BACSU 1e-64 48.8 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00249.1 GT:GENE glnH GT:PRODUCT Glutamine-binding protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1504196..1505026) GB:FROM 1504196 GB:TO 1505026 GB:DIRECTION - GB:GENE glnH GB:PRODUCT Glutamine-binding protein GB:NOTE COG0834 [ET] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain GB:PROTEIN_ID ABE00249.1 GB:DB_XREF GI:90821610 GB:GENE:GENE glnH LENGTH 276 SQ:AASEQ MKNLRKVTLLFSALLMIFFLGACGKKDKAANIAQRTEQTKTVTWGVKADTRLFGLMNIKTGQIEGFDVDMAKALTKKMYGKDAKVKLVQTTAKTKIPLLKNQNIDAVIAAMTITPERRKIVEFSQPYFAAGQSLLVPDNSTIKNVHDLDKKGMVVLAVKGTTAVANIHKFAPKAKVLEFDDYGQAFTALKSGQGQAMSTDNGILAGIASENPGYQVVGGNFTNEPYGIAVDKGQTQMMKRIDKALDELKADGTYDKLIQKWFGNVKGFDAKGAGER GT:EXON 1|1-276:0| BL:SWS:NREP 1 BL:SWS:REP 1->261|GLNH_BACSU|1e-64|48.8|258/273| TM:NTM 1 TM:REGION 7->24| BL:PDB:NREP 1 BL:PDB:REP 45->261|2v25A|2e-30|36.2|213/231| RP:PDB:NREP 1 RP:PDB:REP 40->264|3delB|7e-40|23.3|219/232| RP:PFM:NREP 1 RP:PFM:REP 59->264|PF00497|9e-32|40.3|201/222|SBP_bac_3| HM:PFM:NREP 1 HM:PFM:REP 43->264|PF00497|1.1e-59|43.5|216/225|SBP_bac_3| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00497|IPR001638| GO:PFM GO:0006810|"GO:transport"|PF00497|IPR001638| GO:PFM GO:0030288|"GO:outer membrane-bounded periplasmic space"|PF00497|IPR001638| RP:SCP:NREP 1 RP:SCP:REP 38->272|1xt8A1|2e-42|29.7|232/248|c.94.1.1| HM:SCP:REP 4->264|2a5sA1|2.1e-65|41.9|248/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 3141 OP:NHOMOORG 712 OP:PATTERN -----1----------1-2-11112--11-1111----64783-1113----1----1------1--- ----221322222222211-161129111111755534BA-5443121221-545121--111-653647285556552-3-1--------------------------1-1111111111111-----1--2---111331111-35445562222111---14114461---1-----1--2441111--243444446544454443121554443213243444443A32222222222222222221135267667445656666263674222444433335556566665556333223333333226787777751145734254551313133233313-1-3113166-5121-211111128---1---43222-1F611--21-1-5664527767G---8--7195A-1IFF9A8CACE9BG6---127424532411111111222112-2------------1111-1--1-11---1-------5A78AHLLKMH77887DDGKAAAA7BHDH69A7-1BBB53944D6D8ED127----743322222---12-118-676844977732-24-3--1-------3-6435444443121111111-22----673-2-----2-1111--11111111-11-2-5-1--------87CD6997776775777-7787777677777677669EFCDD5539769888888988898D766767731878888887888--3-111113334--23633343422222222144444-43441-A97A8FFG779772B9A--111111--23344444444433--1-1-----------17--------------1-2-------------------------121-113111--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1--1--------------1----1----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 276 STR:RPRED 100.0 SQ:SECSTR TTTccEEEEEEEEcccTTTcEEEEccccccccTTccTTccEEEEEEccccTTTcEEccTTccEEcHHHHHHHHHHHHHTccTcEEEEEEccGGGHHHHHHTTcccEEcccccccHHHHTTEEEEEEEEEEEcEEEEEEEccccccccGGGcccEHHEEETTcHHHHHHHHcTTccEEEEccHHHHHHHHHTTcccEEEEcHHHHHHHGGGcTTEEEccGGGcEEEEEEEEETTcHHHHHHHHHHHHHHHHTTHHHHHHHHTTGGccHHHHHHHHHH DISOP:02AL 1-3,31-32,270-270,274-277| PSIPRED ccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccEEEEEEcccccEEEEEcccccEEEEHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHcccccEEEccccccHHHHHHHHHcccEEEccEEEEEEcccccccHHHHHccccEEEEEcccHHHHHHHHHccccEEEEEccHHHHHHHHHccccEEEEEcHHHHHHHHHHcccEEEcccccccccEEEEEEcccHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccc //