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Lactobacillus salivarius UCC118 (lsal0)
Gene : glpF.2
DDBJ      :glpF         Glycerol uptake facilitator protein
Swiss-Prot:             

Homologs  Archaea  18/68 : Bacteria  480/915 : Eukaryota  164/199 : Viruses  0/175   --->[See Alignment]
f.19.1
:245 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   12->233 3c02A PDBj 1e-20 31.2 %
:RPS:PDB   61->242 2b5fD PDBj 2e-20 17.0 %
:RPS:SCOP  5->244 1fx8A  f.19.1.1 * 4e-43 30.9 %
:HMM:SCOP  4->247 1fx8A_ f.19.1.1 * 5.9e-62 40.8 %
:RPS:PFM   11->239 PF00230 * MIP 1e-38 51.4 %
:HMM:PFM   8->239 PF00230 * MIP 1.7e-43 31.5 213/227  
:BLT:SWISS 1->243 GLA_LACLC 8e-59 50.0 %
:PROS 67->75|PS00221|MIP
:TM
:REPEAT 2|6->109|136->243

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99275.1 GT:GENE glpF.2 GT:PRODUCT Glycerol uptake facilitator protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(515606..516343) GB:FROM 515606 GB:TO 516343 GB:DIRECTION - GB:GENE glpF GB:PRODUCT Glycerol uptake facilitator protein GB:NOTE COG0580 [G] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) GB:PROTEIN_ID ABD99275.1 GB:DB_XREF GI:90820636 GB:GENE:GENE glpF LENGTH 245 SQ:AASEQ MDFPLFTRLAAEFFGTAIMLMLGNGSVADVELKGTKGYHSGWITISIGYGFAVLVPALMFGSVSGGQFNPAMTLGLAINGAFPWNEAFLYILAQFLGAIAGQLVVVACFYPHYDITEDPESILGTFSTISATNSRFNGFVNEFFGTFTLVFGALAITHTSFFEHGNQGAGYIGIGLLVMVLVTSFGGPTGPALNPARDLGPRIVHALLPLKHKGSSQWDYAWVPVLAPICAAVSGVLIYNIIFGL GT:EXON 1|1-245:0| BL:SWS:NREP 1 BL:SWS:REP 1->243|GLA_LACLC|8e-59|50.0|242/289| PROS 67->75|PS00221|MIP|PDOC00193| TM:NTM 5 TM:REGION 5->27| TM:REGION 43->65| TM:REGION 81->103| TM:REGION 167->189| TM:REGION 221->243| NREPEAT 1 REPEAT 2|6->109|136->243| BL:PDB:NREP 1 BL:PDB:REP 12->233|3c02A|1e-20|31.2|208/242| RP:PDB:NREP 1 RP:PDB:REP 61->242|2b5fD|2e-20|17.0|165/230| RP:PFM:NREP 1 RP:PFM:REP 11->239|PF00230|1e-38|51.4|212/227|MIP| HM:PFM:NREP 1 HM:PFM:REP 8->239|PF00230|1.7e-43|31.5|213/227|MIP| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00230|IPR000425| GO:PFM GO:0006810|"GO:transport"|PF00230|IPR000425| GO:PFM GO:0016020|"GO:membrane"|PF00230|IPR000425| RP:SCP:NREP 1 RP:SCP:REP 5->244|1fx8A|4e-43|30.9|236/254|f.19.1.1| HM:SCP:REP 4->247|1fx8A_|5.9e-62|40.8|240/254|f.19.1.1|1/1|Aquaporin-like| OP:NHOMO 1577 OP:NHOMOORG 662 OP:PATTERN ------------111------------1----121---1111111111---1---------------- 1121211-----1-1----------3-------111-1------11111111111112--11111-2322-1111111----1----------1-------1--11-1-2--------------1-1---------11111----1---11-------------1-2----------------211----1--111111121111211111111111111111212222221-111111111111111111133231221111155112243422144333331123113333333333323223222322323331113333---211111111212----2222-1-11---1----1----1-211--1-2-2---------2-1------------1-----1---111111-11---------------11-1----11111-1111111111221------------------------------------11--11--22222212222223-222222222---1----------1---1--1--1--2---------------------1-11111-1-11--------11----------------------------111221-----1------------1----1----1-------11112111112222222231-22222212222232222222221122-121111111112121112222222--211111111111---------------------212-12-2---1111111----2-----112--2221-111111111111-1112-1111121111111111---1111---111111111111111---------1-1111111111111-----------1----- 11--111-413-2227A652223434211-1-1111111111111156434437343--1113-1222--21-1-22-121--------531A115111-2-3122-231AAB9D734334562C86B6Ed8-97A1644747662543353257858922-7986-81385761-11-----33FBUX3SC2-NIWW1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 240 STR:RPRED 98.0 SQ:SECSTR ####HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTccccHHHHHHHHHHHHHHHHHHHTTTTcccccHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcGGcTTcTGGcccccTTccHHHHHHHHHHHHHHHHHHHHHTEEcccccEEccEEccHHHHHHHHHHHHHHTTTTcccccHHHHHHHHHHHcHHHcTHccHHHHHHTTHHHHHHHHHHHHHHHHHHHcTG# PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcc //