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Lactobacillus salivarius UCC118 (lsal0)
Gene : glyS
DDBJ      :glyS         Glycyl-tRNA synthetase beta chain
Swiss-Prot:SYGB_LACS1   RecName: Full=Glycyl-tRNA synthetase beta subunit;         EC=6.1.1.14;AltName: Full=Glycine--tRNA ligase beta subunit;         Short=GlyRS;

Homologs  Archaea  0/68 : Bacteria  671/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
a.203.1a.211.1
:693 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   332->489 2cqzA PDBj 1e-12 13.6 %
:RPS:SCOP  338->460 1xx7A  a.211.1.1 * 7e-13 17.6 %
:RPS:SCOP  449->556 1riqA1  a.203.1.1 * 7e-09 21.0 %
:RPS:PFM   6->556 PF02092 * tRNA_synt_2f e-126 45.2 %
:HMM:PFM   5->557 PF02092 * tRNA_synt_2f 1.5e-212 48.0 546/549  
:HMM:PFM   585->676 PF05746 * DALR_1 6.6e-07 20.7 92/119  
:BLT:SWISS 1->693 SYGB_LACS1 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99721.1 GT:GENE glyS GT:PRODUCT Glycyl-tRNA synthetase beta chain GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(935920..938001) GB:FROM 935920 GB:TO 938001 GB:DIRECTION - GB:GENE glyS GB:PRODUCT Glycyl-tRNA synthetase beta chain GB:NOTE COG0751 [J] Glycyl-tRNA synthetase, beta subunit GB:PROTEIN_ID ABD99721.1 GB:DB_XREF GI:90821082 GB:GENE:GENE glyS LENGTH 693 SQ:AASEQ MAHTFLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGLADKQADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGVTVDDIFFKELKGTEYVYVKKFIPGKPVSEVLTGMKDVAMDLKFPTMMRWGSNDFEYVRPIKWLVALLDDEVVPFEILDIKTGRTTQGHRFLGEAVDVPSADKYLETLETQKVIADAGVRKAEIRKQIDDLATENNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFYVTDKDGNLLPNFVSVRNGNKDYLENVVAGNEKVLTARLEDAKFFYEEDQQHTIADYVERLKKVMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETELKDLDRASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGELPQSNVGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPLLHEAINYAYAEREDLYKNTQPITNVSETDSFVIDRLAQVLSGNKFRRDILDAVVARADMPFIQALQAAQVLSKHAEDDNFKEVIEALTRVTRLAKKAPEFGSDAVIDSTLFENDTEKVLADEFAKVEAGYGDAEMNEKFTILSSLKDSITAYFDATMIMADDEKVKNNRLLQLVKIAELTEDFGSLDKLIVK GT:EXON 1|1-693:0| SW:ID SYGB_LACS1 SW:DE RecName: Full=Glycyl-tRNA synthetase beta subunit; EC=6.1.1.14;AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS; SW:GN Name=glyS; OrderedLocusNames=LSL_0911; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->693|SYGB_LACS1|0.0|100.0|693/693| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 238->252|vvdedlleevnnlve| RP:PDB:NREP 1 RP:PDB:REP 332->489|2cqzA|1e-12|13.6|154/173| RP:PFM:NREP 1 RP:PFM:REP 6->556|PF02092|e-126|45.2|542/547|tRNA_synt_2f| HM:PFM:NREP 2 HM:PFM:REP 5->557|PF02092|1.5e-212|48.0|546/549|tRNA_synt_2f| HM:PFM:REP 585->676|PF05746|6.6e-07|20.7|92/119|DALR_1| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF02092|IPR002311| GO:PFM GO:0004820|"GO:glycine-tRNA ligase activity"|PF02092|IPR002311| GO:PFM GO:0005524|"GO:ATP binding"|PF02092|IPR002311| GO:PFM GO:0005737|"GO:cytoplasm"|PF02092|IPR002311| GO:PFM GO:0006412|"GO:translation"|PF02092|IPR002311| GO:PFM GO:0006426|"GO:glycyl-tRNA aminoacylation"|PF02092|IPR002311| RP:SCP:NREP 2 RP:SCP:REP 338->460|1xx7A|7e-13|17.6|119/172|a.211.1.1| RP:SCP:REP 449->556|1riqA1|7e-09|21.0|105/212|a.203.1.1| OP:NHOMO 696 OP:NHOMOORG 687 OP:PATTERN -------------------------------------------------------------------- 111--------------------------------------111--------------111---1-------------1111-11111----------------------111111111111111---------------------1111111111111111111111111111111111111-----111--1---------------111111-------11111111111--------------------1111111111111111111111111111111111111111111111111111111111111111111111----------------1---------111--111111111111----111-1-111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111------------------------------------------1111111111--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------11117111111121-2-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 292 STR:RPRED 42.1 SQ:SECSTR ##################################################################################################################################################################################################################################################################################################################TcccGGGcccccccccccTTccHHHHHHHGGGGTcccHHHHHTTccccccHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHTTTTHHHHccccTTTTTTccHHHHHHHHHHHTcGGGHHHHHHHccHHHHTccHHHHHHHHHHHHHHHHHHHHHHHTTccccGGGGGHHHHHHTcGGHHHHHHHHHHHcccHHHHHHHHHHTTTcTTEEEEEEEcccEEEEEEEEccHHHHHHHHHHHHHHHHHHHcGGGcccccccccEcGGGGGccHHHHHHHHHHHHHHHTcc############################################################################################### PSIPRED ccccEEEEEEHHHccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccEEEEEEccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHEEEEEEccEEEEEEEEEcccccHHHHHHHHHHHHHccccccEEEcccccEEEEccHHHHHHHHccEEEEEEEccEEEccEEEEcccccccEEEccHHHHHHHHHHcccEEcHHHHHHHHHHHHHHHHHHcccEEEEEHHHHHHHHHHHHccEEEEEEEcHHHHcccHHHHHHHHHHccEEEEEEcccccccccEEEEEccccccHHHHHHccHHHcccHHHHHHHHHHHHHcccHHHHHHHHHccEEEHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccHHHcccc //