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Lactobacillus salivarius UCC118 (lsal0)
Gene : lepB
DDBJ      :lepB         Signal peptidase I
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  234/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
b.87.1
:195 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->176 1b12B PDBj 5e-10 34.9 %
:RPS:PDB   22->103,141->182 1b12A PDBj 2e-13 45.2 %
:RPS:SCOP  22->94,142->182 1b12A  b.87.1.2 * 4e-13 46.3 %
:HMM:SCOP  22->189 1b12A_ b.87.1.2 * 5e-40 33.5 %
:RPS:PFM   80->181 PF10502 * Peptidase_S26 1e-13 53.0 %
:HMM:PFM   30->104 PF00717 * Peptidase_S24 8.3e-14 46.3 67/70  
:HMM:PFM   68->177 PF10502 * Peptidase_S26 4e-12 29.8 94/138  
:BLT:SWISS 2->181 LEP_STAAW 4e-22 39.3 %
:PROS 81->93|PS00760|SPASE_I_2
:PROS 148->161|PS00761|SPASE_I_3
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99686.1 GT:GENE lepB GT:PRODUCT Signal peptidase I GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 901296..901883 GB:FROM 901296 GB:TO 901883 GB:DIRECTION + GB:GENE lepB GB:PRODUCT Signal peptidase I GB:NOTE COG0681 [U] Signal peptidase I GB:PROTEIN_ID ABD99686.1 GB:DB_XREF GI:90821047 GB:GENE:GENE lepB LENGTH 195 SQ:AASEQ MKILKGWVLPIAIGLLVGLLIKTFVFTVVRVDGISMFPNLQNKELVMEIHHAKIKRDSVIVFDAYGVDKRPDVAKNARYVKRVIALPGDKVEYKNDGTLYVNGKKESQSYISKKQQKQGTLNIQEAAVEEQGVALGTGKIITVPKNSYFVLGDNRAVSNDSRYYGFVPKDKVNGVAKVPFWNDKKDLINSYDKND GT:EXON 1|1-195:0| BL:SWS:NREP 1 BL:SWS:REP 2->181|LEP_STAAW|4e-22|39.3|163/191| PROS 81->93|PS00760|SPASE_I_2|PDOC00418| PROS 148->161|PS00761|SPASE_I_3|PDOC00418| TM:NTM 1 TM:REGION 7->29| SEG 104->118|kkesqsyiskkqqkq| BL:PDB:NREP 1 BL:PDB:REP 24->176|1b12B|5e-10|34.9|146/211| RP:PDB:NREP 1 RP:PDB:REP 22->103,141->182|1b12A|2e-13|45.2|116/239| RP:PFM:NREP 1 RP:PFM:REP 80->181|PF10502|1e-13|53.0|83/101|Peptidase_S26| HM:PFM:NREP 2 HM:PFM:REP 30->104|PF00717|8.3e-14|46.3|67/70|Peptidase_S24| HM:PFM:REP 68->177|PF10502|4e-12|29.8|94/138|Peptidase_S26| RP:SCP:NREP 1 RP:SCP:REP 22->94,142->182|1b12A|4e-13|46.3|107/239|b.87.1.2| HM:SCP:REP 22->189|1b12A_|5e-40|33.5|161/247|b.87.1.2|1/1|LexA/Signal peptidase| OP:NHOMO 353 OP:NHOMOORG 237 OP:PATTERN -------------------------------------------------------------------- 121-----------------------------------------1---1---------------------------11-------------------------------------------------------------11111-1-1111111-111-----2-1211111-1-111-1-11113-----112343444343444463213323443213231133333351211111111111111111212-21--112123311--111123------1----11-----------111111111111111111111111121411111111121-11211-2-311113--221-----1-1111---------1----------------------------------------------------------------------------------------11-----------------------------------------------------------------------------------211----------------2----1--1-111-11111-211-------2---------------------------------1-1---------1-11--11---1---1--1--------------------------------------------------------------------------------------------------------------------------------------1111111-11111-111---------1--------------11--------------1------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------1-------------------------------------------------1---------------------------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 170 STR:RPRED 87.2 SQ:SECSTR #####################ccccEEEEEccccTTTTTccTTEEEEEEEEccccTTcEEEEEcTTcTTcETTcTTcEEEEEEEEcTTcEEEEETTHTTEEEEHcccEEEEEcccccETTccEEEEcccccEEEccHHHHEEccTTEEEEEcccTTccccHHHHccEEGGGEEEEEEEEEEEHHHHHHTTT#### DISOP:02AL 107-125,189-191,193-196| PSIPRED cHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEccccccccccccEEEEEEccccccccEEEEEccccccccccccccEEEEEEEEccccEEEEEEccEEEEcccHHHHHHHHHHHHHHccccccccccccccccccccccEEEcccEEEEEcccccccccccEEEEEEHHHEEEEEEEEEEcccccccccccccc //