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Lactobacillus salivarius UCC118 (lsal0)
Gene : mutS.1
DDBJ      :mutS         DNA mismatch repair protein
Swiss-Prot:MUTS2_LACS1  RecName: Full=MutS2 protein;

Homologs  Archaea  18/68 : Bacteria  689/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
a.113.1b.22.1c.37.1d.203.1d.68.8
:786 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   308->504 1nneB PDBj 1e-19 28.9 %
:BLT:PDB   711->783 2zqeA PDBj 1e-12 42.5 %
:RPS:PDB   2->513 1e3mB PDBj 3e-33 14.0 %
:RPS:PDB   532->641 3cwgA PDBj 3e-04 15.5 %
:RPS:PDB   706->786 2d9iA PDBj 2e-13 21.6 %
:RPS:SCOP  156->232 1jh5A  b.22.1.1 * 4e-04 16.9 %
:RPS:SCOP  406->501 2v4jC1  d.203.1.1 * 4e-16 14.6 %
:RPS:SCOP  710->786 2d9iA1  d.68.8.1 * 3e-14 22.9 %
:HMM:SCOP  22->289 1e3mA1 a.113.1.1 * 1.3e-28 22.9 %
:HMM:SCOP  290->518 1e3mA2 c.37.1.12 * 8.8e-47 29.8 %
:RPS:PFM   126->230 PF01884 * PcrB 4e-04 29.4 %
:RPS:PFM   293->510 PF00488 * MutS_V 9e-30 35.0 %
:RPS:PFM   711->783 PF01713 * Smr 2e-09 43.8 %
:HMM:PFM   291->512 PF00488 * MutS_V 2.2e-43 30.8 221/234  
:HMM:PFM   711->786 PF01713 * Smr 5.9e-18 38.2 76/83  
:HMM:PFM   82->285 PF05192 * MutS_III 9.6e-07 21.6 116/219  
:HMM:PFM   562->632 PF03179 * V-ATPase_G 0.00017 22.5 71/105  
:BLT:SWISS 1->786 MUTS2_LACS1 0.0 100.0 %
:PROS 409->425|PS00486|DNA_MISMATCH_REPAIR_2
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99913.1 GT:GENE mutS.1 GT:PRODUCT DNA mismatch repair protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1132574..1134934) GB:FROM 1132574 GB:TO 1134934 GB:DIRECTION - GB:GENE mutS GB:PRODUCT DNA mismatch repair protein GB:NOTE COG0249 [L] Mismatch repair ATPase (MutS family) GB:PROTEIN_ID ABD99913.1 GB:DB_XREF GI:90821274 GB:GENE:GENE mutS LENGTH 786 SQ:AASEQ MNKKVLKTLEYDKVKQNLYAFTTTSMGKRLIDKLEPSSDYDEISNSLAQTKDGADILRIKGGIPVPNLISIKSFLKRLDIGGTLNSKELAAIGRVLRATNEVNRFFKDLADNKIKLEVLFDDVAKLESLPEISKKLLVSIENDGHVTDDASTLLKSIRQQISVTEETIRERLNAYTRGTNSKYLSNAVVTIRNERYVLPVKQEYRSKFGGIVHDQSSSGQTLFVEPAVIVELNNRLRQQQVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKENDVYLRQVWHPLLDMKKAVKNDIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLDKMIVMAARQLTSQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDLETNFHQFERQKENMLEQAKERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQGRVNALHQETNLKKNKVLRKAKQQQELHPNDDVMVNSYGQRGVLLRKAGNHAWEVQLGILKMKIDESDLEKIKVKDTQPKRAGAVLKSSSSSHVSPTLDLRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGKGTGALRTGIINYLKQNKAVKNFEFASPNNGGNGATVVYFK GT:EXON 1|1-786:0| SW:ID MUTS2_LACS1 SW:DE RecName: Full=MutS2 protein; SW:GN Name=mutS2; OrderedLocusNames=LSL_1105; SW:KW ATP-binding; Complete proteome; DNA-binding; Nucleotide-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->786|MUTS2_LACS1|0.0|100.0|786/786| GO:SWS:NREP 3 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| PROS 409->425|PS00486|DNA_MISMATCH_REPAIR_2|PDOC00388| COIL:NAA 53 COIL:NSEG 1 COIL:REGION 551->603| SEG 243->254|ereeinrileel| SEG 337->349|tggktitlktlgl| SEG 368->380|igifddifadigd| SEG 701->705|sssss| BL:PDB:NREP 2 BL:PDB:REP 308->504|1nneB|1e-19|28.9|194/759| BL:PDB:REP 711->783|2zqeA|1e-12|42.5|73/80| RP:PDB:NREP 3 RP:PDB:REP 2->513|1e3mB|3e-33|14.0|486/732| RP:PDB:REP 532->641|3cwgA|3e-04|15.5|110/501| RP:PDB:REP 706->786|2d9iA|2e-13|21.6|74/96| RP:PFM:NREP 3 RP:PFM:REP 126->230|PF01884|4e-04|29.4|102/224|PcrB| RP:PFM:REP 293->510|PF00488|9e-30|35.0|217/229|MutS_V| RP:PFM:REP 711->783|PF01713|2e-09|43.8|73/83|Smr| HM:PFM:NREP 4 HM:PFM:REP 291->512|PF00488|2.2e-43|30.8|221/234|MutS_V| HM:PFM:REP 711->786|PF01713|5.9e-18|38.2|76/83|Smr| HM:PFM:REP 82->285|PF05192|9.6e-07|21.6|116/219|MutS_III| HM:PFM:REP 562->632|PF03179|0.00017|22.5|71/105|V-ATPase_G| GO:PFM:NREP 3 GO:PFM GO:0005524|"GO:ATP binding"|PF00488|IPR000432| GO:PFM GO:0006298|"GO:mismatch repair"|PF00488|IPR000432| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF00488|IPR000432| RP:SCP:NREP 3 RP:SCP:REP 156->232|1jh5A|4e-04|16.9|77/144|b.22.1.1| RP:SCP:REP 406->501|2v4jC1|4e-16|14.6|89/103|d.203.1.1| RP:SCP:REP 710->786|2d9iA1|3e-14|22.9|70/83|d.68.8.1| HM:SCP:REP 22->289|1e3mA1|1.3e-28|22.9|258/297|a.113.1.1|1/1|DNA repair protein MutS, domain III| HM:SCP:REP 290->518|1e3mA2|8.8e-47|29.8|228/234|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1718 OP:NHOMOORG 899 OP:PATTERN ------------------------21112112-----------1111111111--------------- 221-------------------------------------------------------------------------------121221222212221112222222222211111111111111122222221222222221112322222212211222222222222121222122212221212222122233333233333333333222233322233232222223322222222222222222222322222223332222222222211122222222222122222222222222222222222222222222223433332333323333332222322222222222122222222222222221---------1-11-1111--1-------------11-11-1---1-----------------11-11-1111---------11111---111111111111------------1-1-1-----11---11111111111111111111111111111--11111------11-111121111-------22211121111222222222112222222222222311111111111111111111111112133111111111111111111111111111111--1211211-11111111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11---1-1111211111111111111-11111111111---1111111111-1111111111111111111111111111111111111111111111--1---11-122222212112-------------------------2332322222111 2211442-4121233554434454333443444443444444344444342132232221112131242-222222412334433334-4355445544434455314325363333221133-4614-5O3-4253122413422321351363543436C2535-221512444222D4441373555654313211 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 714 STR:RPRED 90.8 SQ:SECSTR #HTTccccTTccccccHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHTGGGHHHHHTTccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHcccHHHHHHHHH#####HcccccccccTTcccccTTccHHHHHHHHHHHHHHHHH#HHHHHHHH#HHHccTTcEEEEETTTEEEEEEEGGGGGGccTTcEEEEcccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccEEcccccEEEEEEccTTHHHccccccEEEEEcTTccEEEEcccTHHHHHHHHHHHHHHTTTccccccEEEEHHHHHTTTccccccEEEEcccccEEEEcccHHHHHHHHHHHccTTcEEEEcTTTTccHHHHHHHHHHHHHHHHHTccEEEEEcccGGGGGGGGTTTEEEEEcccEEETTEEEccccEEcccccccHHHHHHHTTccHHHHHHHHHHHHHcccccccccHHHHTTcccccccccccGGGTTTTHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccTHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHTTccccccTHHHHHHH################################################################ccccEEEcTTccHHHHHHHHHHHHHHHHTTcccEEEEEccccTTcHHHHHHHHHHHTTccEEEEEccEEcccTTcEEEEcc DISOP:02AL 1-2,512-531,593-641,680-710| PSIPRED ccHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccEEEEEEEHHHccccccEEEEEEccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccEEEEEEcccccccccccEEEEEEEccccEEEEEEcccccccEEEHHHHHHHHHHHHHcccccccccEEEEEHHHHHHHcccccHHHHcHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHcccEEEEEEEEEccEEEEEEEEEEccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEccccccEEEEEEccccEEEEEEccEEEEEcHHHccccccccccccccccEEccccccccccEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHccccccEEcccccccccccEEEEEEc //