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Lactobacillus salivarius UCC118 (lsal0)
Gene : mutS.2
DDBJ      :mutS         DNA mismatch repair protein
Swiss-Prot:MUTS_LACS1   RecName: Full=DNA mismatch repair protein mutS;

Homologs  Archaea  19/68 : Bacteria  776/915 : Eukaryota  196/199 : Viruses  1/175   --->[See Alignment]
a.113.1c.37.1c.55.6d.203.1d.75.2
:876 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->793 1ng9A PDBj e-147 38.9 %
:RPS:PDB   4->795 1e3mA PDBj e-145 34.3 %
:RPS:SCOP  1->113 1e3mA4  d.75.2.1 * 1e-49 49.6 %
:RPS:SCOP  117->270 1ewqA3  c.55.6.1 * 5e-23 22.6 %
:RPS:SCOP  257->557 1e3mA1  a.113.1.1 * 5e-84 36.6 %
:RPS:SCOP  604->623 1e6cA  c.37.1.2 * 4e-04 30.0 %
:RPS:SCOP  678->778 2v4jC1  d.203.1.1 * 1e-25 17.0 %
:HMM:SCOP  1->113 1e3mA4 d.75.2.1 * 1.7e-44 51.3 %
:HMM:SCOP  117->270 1ewqA3 c.55.6.1 * 9.3e-36 38.4 %
:HMM:SCOP  257->559 1e3mA1 a.113.1.1 * 3.8e-90 41.8 %
:HMM:SCOP  560->795 1e3mA2 c.37.1.12 * 1.3e-68 39.3 %
:RPS:PFM   8->118 PF01624 * MutS_I 8e-37 55.9 %
:RPS:PFM   253->555 PF05192 * MutS_III 1e-64 47.8 %
:RPS:PFM   561->788 PF00488 * MutS_V 1e-72 58.0 %
:HMM:PFM   560->793 PF00488 * MutS_V 8.7e-101 55.2 232/234  
:HMM:PFM   251->556 PF05192 * MutS_III 9.6e-67 40.8 213/219  
:HMM:PFM   8->119 PF01624 * MutS_I 2e-48 56.2 112/113  
:HMM:PFM   128->243 PF05188 * MutS_II 5.1e-15 30.2 116/137  
:BLT:SWISS 1->876 MUTS_LACS1 0.0 100.0 %
:PROS 683->699|PS00486|DNA_MISMATCH_REPAIR_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99936.1 GT:GENE mutS.2 GT:PRODUCT DNA mismatch repair protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1157166..1159796) GB:FROM 1157166 GB:TO 1159796 GB:DIRECTION - GB:GENE mutS GB:PRODUCT DNA mismatch repair protein GB:NOTE COG0249 [L] Mismatch repair ATPase (MutS family) GB:PROTEIN_ID ABD99936.1 GB:DB_XREF GI:90821297 GB:GENE:GENE mutS LENGTH 876 SQ:AASEQ MPQKTKQTPMMEQYMQIKKQYPDAFLFYRLGDFYEMFYDDAIKGSQILELTLTQRNKKAVDPIPMCGVPHHAAQNYIDILVDKGYKVAICEQVEDPKQAKGMVKREVIQLVTPGTIIDESAGEAKENNYLTALHFENDQYGFAYVDLSTGELKVSVLNTIDTILNELISLRTKEIVVDSSVNDDVLNQIKNLKILISEQNDTEDSSEVSFASQDVENSVEVEVIKHLITYLKITQKRALSHLQRAVHYEPSQYLKMDYHAKRNLELLRNLRTQKKSGTLLWLLDSTKTAMGGRLLKQWIDRPLINLKEIEARQSMVENLLTHYFERSGLQEELVNVYDLERLAGKVAFGSVNGRDLIQLRTSLEHIPQIRYIIQELNDDGTFDEIFDKLDPIEDIADLIEQAIEDEPPISVTDGNLIKPGYSQELDEYVDAMKNGKAWLAELEAKERQATGINNLKIGFNRVFGYYIEVSKGNLSKLPEDRYQRKQTLTNAERFITPELKEKESLILGAESKAKELEYKIFTGIRDQIKDEIQRIQELAGAVAALDVLQSFATVSEQGHFVKPELTTDNHSLDIKDGWHPVVEKVMGKQSYIPNDIKMDDDLDVLLITGPNMSGKSTYMRQLALTVVIAQIGCFVPAKSAKMPIFDQIFTRIGAADDLISGESTFMVEMKETNVALMNATRNSLLLFDEIGRGTATYDGMALAQAIIEYVHNNIHAKTLFSTHYHELTILDESLDKLQNVHVGAIEKNGELIFLHKMQEGPADKSYGIHVAKLAGMPDKLLKRADSILNKLESENDFTVDSTESYAEEKHIEEKNENETSEIQEEQLSLFQPEAVSLDSNQSKILKEIKNANLMGMTPMDVMNIVFKWQKELNKKG GT:EXON 1|1-876:0| SW:ID MUTS_LACS1 SW:DE RecName: Full=DNA mismatch repair protein mutS; SW:GN Name=mutS; OrderedLocusNames=LSL_1128; SW:KW ATP-binding; Complete proteome; DNA damage; DNA repair; DNA-binding;Nucleotide-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->876|MUTS_LACS1|0.0|100.0|876/876| GO:SWS:NREP 5 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| PROS 683->699|PS00486|DNA_MISMATCH_REPAIR_2|PDOC00388| SEG 176->185|vvdssvnddv| SEG 807->818|eekhieeknene| BL:PDB:NREP 1 BL:PDB:REP 8->793|1ng9A|e-147|38.9|772/794| RP:PDB:NREP 1 RP:PDB:REP 4->795|1e3mA|e-145|34.3|752/765| RP:PFM:NREP 3 RP:PFM:REP 8->118|PF01624|8e-37|55.9|111/113|MutS_I| RP:PFM:REP 253->555|PF05192|1e-64|47.8|301/309|MutS_III| RP:PFM:REP 561->788|PF00488|1e-72|58.0|226/229|MutS_V| HM:PFM:NREP 4 HM:PFM:REP 560->793|PF00488|8.7e-101|55.2|232/234|MutS_V| HM:PFM:REP 251->556|PF05192|9.6e-67|40.8|213/219|MutS_III| HM:PFM:REP 8->119|PF01624|2e-48|56.2|112/113|MutS_I| HM:PFM:REP 128->243|PF05188|5.1e-15|30.2|116/137|MutS_II| GO:PFM:NREP 9 GO:PFM GO:0005524|"GO:ATP binding"|PF01624|IPR007695| GO:PFM GO:0006298|"GO:mismatch repair"|PF01624|IPR007695| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF01624|IPR007695| GO:PFM GO:0005524|"GO:ATP binding"|PF05192|IPR007696| GO:PFM GO:0006298|"GO:mismatch repair"|PF05192|IPR007696| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF05192|IPR007696| GO:PFM GO:0005524|"GO:ATP binding"|PF00488|IPR000432| GO:PFM GO:0006298|"GO:mismatch repair"|PF00488|IPR000432| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF00488|IPR000432| RP:SCP:NREP 5 RP:SCP:REP 1->113|1e3mA4|1e-49|49.6|113/115|d.75.2.1| RP:SCP:REP 117->270|1ewqA3|5e-23|22.6|146/146|c.55.6.1| RP:SCP:REP 257->557|1e3mA1|5e-84|36.6|295/297|a.113.1.1| RP:SCP:REP 604->623|1e6cA|4e-04|30.0|20/170|c.37.1.2| RP:SCP:REP 678->778|2v4jC1|1e-25|17.0|94/103|d.203.1.1| HM:SCP:REP 1->113|1e3mA4|1.7e-44|51.3|113/115|d.75.2.1|1/1|DNA repair protein MutS, domain I| HM:SCP:REP 117->270|1ewqA3|9.3e-36|38.4|146/0|c.55.6.1|1/1|DNA repair protein MutS, domain II| HM:SCP:REP 257->559|1e3mA1|3.8e-90|41.8|297/297|a.113.1.1|1/1|DNA repair protein MutS, domain III| HM:SCP:REP 560->795|1e3mA2|1.3e-68|39.3|234/234|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2609 OP:NHOMOORG 992 OP:PATTERN ------------------------22222222-----------1111111111----------1---- 423-------------------------------------2-----------------------------------------121221443413333112332338362311111111111111122222221222244211113321221122222211112212222212122222122222212222122233333233333333333222233322233232222223333333333333333323333322233223332222332222212222222222322122222222222222222222222332222222224454554555535454443445543222332233332323222342232222111111111111111111111111111111111-131111111111111111111111111111111111111111111111111111111211111111111111111111111111-11111111111111111111111111111111111111--111111-11121111111211111111111222111311112222222211222222222112133112-------------------1-21-331111111111111111111111111111111-1211211-11131111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11111111111211111111111111-111111121111111111111111-1111111111111111111111111111111111111111111111--1122222222222212212-------------------------3333333213111 3322666-C5525556667466655466665665566676666665656655665666666645346426664446637766666644-6C6666666667567652795A5957575544555673B3zx8-76A4455655634544563575764538F47573343534967579*88867A56G69G7775564 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 792 STR:RPRED 90.4 SQ:SECSTR ###ccGGGccHHHHHHHHHTcTTcEEEEEcTTEEEEEHHHHHHHHHHHTcccEEEccTTccccEEEEEEGGGHHHHHHHHHHTTccEEEEEEcccGGGccccccEEEEEEEcTTTcccTTTccTTccccEEEEEEccccEEEEEEcTTTccEEEEccccHHHHHHHHHHHcccEEEEETTcccGGTTTcTTEEEEcGGGGcHHHHHHHHHTccccTcHHHHHHHHHHHHHHHHHHccccTTccccEccGGGGGccEcHHHHHHHTccccTTccccTTcHHHHHcccccHHHHHHHHHHHTHccccHHHHHHHHHHHHHHTTTHHHHHHHHHHHHTTccHHHHHHHHHHTcccHHHHHHHHHHHTTHHHHHHHHHccHcccHHHHHHHHHcccHHHHHHHHHHcccccccccTTcccccTTccHHHHHHHHHHTcHHHHHHHHHHHHHHHHTcTTcEEEEETTTEEEEEEEHHHHTTccTEETcEEEEcccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTTccccEEEEcccccEEEEEEccTTTTTTccccccccEEEEEcccccEEEEEccTccHHHHHHHHHHHEEHHHTTTccccccEEEEccccEEEEEEcccccccccccHHcHHHHHHHHHHHccTTcTcEEEEcccccccTTHHHHHHHHHHHHHHHTTccEEEEEcEcccGGGGGHHHHTTEEEEEEEEEEccccEEEEEEEEcccccccHHHHHHHTTccHHHHHHHHHHHHHHHHTc################################################################################# DISOP:02AL 1-4,59-59,92-105,790-827,834-835,837-838,874-877| PSIPRED ccccccccHHHHHHHHHHHHcccEEEEEEcccEEEEEccHHHHHHHHHcEEEcccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEcccccccccccEEEEEEEEccEEEEEccccccccccEEEEEEEccccEEEEEEEccccEEEEEEEccHHHHHHHHHcccccEEEEEccccHHHHHHHHcccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccEEEEccccEEEEcHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccEEEEEEcHHHHHHcccccEEEEEEccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccEEEEEEcccHHHHHHcccccEEEEEEEEcccccEEEEEcccccHHHHHHHHHHHHHHHHHcccccccccEEEccEEEEEEEEcccccHHccHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHccccEEEEEEEEEEEccEEEEEEEEEEccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHcccc //