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Lactobacillus salivarius UCC118 (lsal0)
Gene : nifS.2
DDBJ      :nifS         Cysteine desulfurase / Selenocysteine lyase
Swiss-Prot:             

Homologs  Archaea  40/68 : Bacteria  890/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:382 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->368 1ecxB PDBj 4e-63 38.2 %
:RPS:PDB   1->377 1ecxA PDBj 6e-47 35.5 %
:RPS:SCOP  2->368 1elqA  c.67.1.3 * 2e-60 22.4 %
:HMM:SCOP  1->378 1c0nA_ c.67.1.3 * 8.5e-94 35.6 %
:RPS:PFM   2->364 PF00266 * Aminotran_5 1e-52 40.9 %
:HMM:PFM   2->366 PF00266 * Aminotran_5 7.7e-73 32.5 351/371  
:BLT:SWISS 1->381 NIFS_LACDA e-128 58.5 %
:PROS 193->212|PS00595|AA_TRANSFER_CLASS_5

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99882.1 GT:GENE nifS.2 GT:PRODUCT Cysteine desulfurase / Selenocysteine lyase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1098119..1099267) GB:FROM 1098119 GB:TO 1099267 GB:DIRECTION - GB:GENE nifS GB:PRODUCT Cysteine desulfurase / Selenocysteine lyase GB:NOTE COG1104 [E] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes GB:PROTEIN_ID ABD99882.1 GB:DB_XREF GI:90821243 GB:GENE:GENE nifS LENGTH 382 SQ:AASEQ MIYFDNSATTQVLPEVLSTYNAVSEKIWGNPSSLHAMGEQAFNLLEQSRKQIADLLHCNIDEIYFTSGGTEGDNWVVKGTAIEKRPYGRHIITSSVEHPAVLNSLHQLEKLGYDVTYLPVDENGRVSAEDLKTAIRKDTILVSIMAVNNEVGAIQPLKEIAAVLEDFPKIHFHVDAVQGVGKGIQELLEQDRVDFLTFSGHKFHAPRGIGFMYKKRGRMIAPLMSGGGQEKALRSGTENLPAIASMAKALRLTLENEEKKVAQQKAIKEKIYNHISKRSKVTVFSKLNDEFAPHILCFAISGVRGETIVHAFENYDIYISTTSACSSKKGITSGTLTAMKIPDNIATSAVRVSLDEKNTLAEADKFIEIFDVLYEKFKKINS GT:EXON 1|1-382:0| BL:SWS:NREP 1 BL:SWS:REP 1->381|NIFS_LACDA|e-128|58.5|381/385| PROS 193->212|PS00595|AA_TRANSFER_CLASS_5|PDOC00514| BL:PDB:NREP 1 BL:PDB:REP 2->368|1ecxB|4e-63|38.2|353/365| RP:PDB:NREP 1 RP:PDB:REP 1->377|1ecxA|6e-47|35.5|363/364| RP:PFM:NREP 1 RP:PFM:REP 2->364|PF00266|1e-52|40.9|337/359|Aminotran_5| HM:PFM:NREP 1 HM:PFM:REP 2->366|PF00266|7.7e-73|32.5|351/371|Aminotran_5| GO:PFM:NREP 1 GO:PFM GO:0008152|"GO:metabolic process"|PF00266|IPR000192| RP:SCP:NREP 1 RP:SCP:REP 2->368|1elqA|2e-60|22.4|339/381|c.67.1.3| HM:SCP:REP 1->378|1c0nA_|8.5e-94|35.6|362/0|c.67.1.3|1/1|PLP-dependent transferases| OP:NHOMO 2723 OP:NHOMOORG 1125 OP:PATTERN 111-2-1-------1-1------211112111111-------15623512443111-1111---2-43 3431322233322353322-22332422222212222211244322222223432213114231333433211112222353321221111111222212252335354422222222222222311111111111111331-12445644453334333333343286453333333233331112221134444444445444444455442444444443344444434433333333333333343333422312332333333223331113233333333333333333333333333333333333333333333327555444444434434442333633443432155433133246542223215222222222433442224443422222222222-33333333332222223332223243222222232232133333333144324332222222222-222222222222222222133414111112344422444422114443224352342112223212224122212313431111111113223433222111112111113633445623333333321111111111121111111111-1342233223324332222232222232342232-2221211111132432323333333333-33333333333333333333434357322222222222222224333233332333353333354222133333222242223222222222222222222121211143332333332434434442222222221222222222223221111111111----11321133321--11111421111-1---1--11----1111-111-221112222512 1111112-7321-211111111111111111111111111111111111112111111111111111111111111111111111111-1111111111112111212324232233223222222242ET2-3222211322222221122132222222124131111A22332122V3332241421223322222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 382 STR:RPRED 100.0 SQ:SECSTR cEEccTTTcccccHHHHHHHHHHHHTccccTTcccHHHHHHHHHHHHHHHHHHHHHTccGGGEEEEccHHHHHHHHHHHHHHTTTTTccEEEEcTTccHHHHHHHHHHHHTTcEEEEccccTTccccHHHHHHHccTTEEEEEEEcccTTTcccccHHHHHHHHHHHcTTcEEEEEcTTTTTTcccccTTTcccEEEEEGGGTTcccccEEEEEcTTcccccccccccTTTTTccccccHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTcEEcccccGGGccTTEEEEEcTTccHHHHHHHHHHTTEEccccHHHHcEEEETTEEEEHTTccHHHHTTcEEEEccTTccHHHHHHHHHHHHHHHHHcHHcTH DISOP:02AL 381-383| PSIPRED cEEccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccccHHHHHHHcccccEEEEEEcccccccEEccHHHHHHHHHHccccEEEEccccccccccccccHHccccEEEEEHHHcccccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccEEEEEEccccHHHHHHHHHHcccEEEEccHHcccccccHHHHHHccccHHHcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcc //