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Lactobacillus salivarius UCC118 (lsal0)
Gene : nth
DDBJ      :nth          Endonuclease III
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  871/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
a.96.1
:213 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->213 1p59A PDBj 8e-62 50.7 %
:RPS:PDB   2->211 2abkA PDBj 5e-46 38.8 %
:RPS:SCOP  1->213 1ornA  a.96.1.1 * 1e-70 50.7 %
:HMM:SCOP  1->214 1ornA_ a.96.1.1 * 7.4e-67 41.6 %
:RPS:PFM   35->165 PF00730 * HhH-GPD 6e-22 45.0 %
:RPS:PFM   189->205 PF10576 * EndIII_4Fe-2S 8e-04 64.7 %
:HMM:PFM   36->170 PF00730 * HhH-GPD 2.2e-27 45.1 102/121  
:HMM:PFM   189->205 PF10576 * EndIII_4Fe-2S 1.7e-06 64.7 17/17  
:BLT:SWISS 1->213 END3_BACSU 1e-61 51.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99501.1 GT:GENE nth GT:PRODUCT Endonuclease III GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 742431..743072 GB:FROM 742431 GB:TO 743072 GB:DIRECTION + GB:GENE nth GB:PRODUCT Endonuclease III GB:NOTE COG0177 [L] Predicted EndoIII-related endonuclease GB:PROTEIN_ID ABD99501.1 GB:DB_XREF GI:90820862 GB:GENE:GENE nth LENGTH 213 SQ:AASEQ MLDSKETQYALQEMGKMFPNATTSLIADSDYHFLLAVILSAQTTDKAVNKVTPLLFERYKYPIDMANADPKEVAEYIKTIGLYKNKAKYLVECSKMLVENFNSVVPKTHKELMSLSGVGRKTADVVLAERFGVPAFAVDTHVHRISKRLAIVPEDATVRETEKILMSKVPKEDWIKSHHRMIFWGRYQCMARAPKCETCPLLEICQEGQKRIK GT:EXON 1|1-213:0| BL:SWS:NREP 1 BL:SWS:REP 1->213|END3_BACSU|1e-61|51.6|213/219| BL:PDB:NREP 1 BL:PDB:REP 1->213|1p59A|8e-62|50.7|213/214| RP:PDB:NREP 1 RP:PDB:REP 2->211|2abkA|5e-46|38.8|209/211| RP:PFM:NREP 2 RP:PFM:REP 35->165|PF00730|6e-22|45.0|131/144|HhH-GPD| RP:PFM:REP 189->205|PF10576|8e-04|64.7|17/17|EndIII_4Fe-2S| HM:PFM:NREP 2 HM:PFM:REP 36->170|PF00730|2.2e-27|45.1|102/121|HhH-GPD| HM:PFM:REP 189->205|PF10576|1.7e-06|64.7|17/17|EndIII_4Fe-2S| GO:PFM:NREP 3 GO:PFM GO:0006284|"GO:base-excision repair"|PF00730|IPR003265| GO:PFM GO:0004519|"GO:endonuclease activity"|PF10576|IPR003651| GO:PFM GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|PF10576|IPR003651| RP:SCP:NREP 1 RP:SCP:REP 1->213|1ornA|1e-70|50.7|213/214|a.96.1.1| HM:SCP:REP 1->214|1ornA_|7.4e-67|41.6|214/214|a.96.1.1|1/1|DNA-glycosylase| OP:NHOMO 1527 OP:NHOMOORG 1104 OP:PATTERN 22111111212222212121112143343322111221222221111112332111111112221111 2121222222212121111-11111111111111111111111112212---111221--1112111212221112111111133333222122221--22322212221222222222222221111111111312111211221213122122111111111112111111111111111122311221222222222221222222222222222122232222222222222222222222222111222111221-11111111111----2221111111111111111111111111111111111111111111121211111111111111111111311113112111111221121111211111222112222111111111111122222222221-3323312321121221122222212111112111211211111111111111111111111111111111111111111111112311112111211111111111111111111111111111111111111111122121122111111212211111111212232122112121211112111123323111112222211112222111113222211122112211322221211122211212--1111112-11111111221111111111-111111111111111111122222221111111111111111111111111111111111111111112111112221122122222112111121111-11111112121111111111111111111111111112221222222222211111111111111111122222211111111112-------------------------1121122112211 11-1231-3111121111-1111111-1111111111-11-1111111221111-1111111111111111111112-2211111111-1211121111111121111-11-11112--11-111111-171--1-----11111-1---1--1111-111112211111-11112222G2332-3--1-421132222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 213 STR:RPRED 100.0 SQ:SECSTR cccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHTTTccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHHTTTcccccHHHHHHcTTccHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccHHHHHHHHHHHccGGGTTTHHHHHHHHHHHTcccccccGGGcTTGGGcccTTccHH DISOP:02AL 1-3,212-214| PSIPRED cccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccHHHcccHHccHHHHcccc //