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Lactobacillus salivarius UCC118 (lsal0)
Gene : nupC
DDBJ      :nupC         Nucleoside transport protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  307/915 : Eukaryota  71/199 : Viruses  0/175   --->[See Alignment]
:415 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   8->76 PF01773 * Nucleos_tra2_N 2e-09 39.1 %
:RPS:PFM   285->414 PF07662 * Nucleos_tra2_C 4e-16 43.0 %
:HMM:PFM   192->414 PF07662 * Nucleos_tra2_C 3.8e-51 37.0 200/208  
:HMM:PFM   8->81 PF01773 * Nucleos_tra2_N 1.1e-23 35.1 74/75  
:BLT:SWISS 1->415 NUPG_BACSU 1e-66 38.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00537.1 GT:GENE nupC GT:PRODUCT Nucleoside transport protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1823730..1824977) GB:FROM 1823730 GB:TO 1824977 GB:DIRECTION - GB:GENE nupC GB:PRODUCT Nucleoside transport protein GB:NOTE COG1972 [F] Nucleoside permease GB:PROTEIN_ID ABE00537.1 GB:DB_XREF GI:90821898 GB:GENE:GENE nupC LENGTH 415 SQ:AASEQ MYLAINIVGVLVFLAIGWLLSKDRKQINWRAIAVMVLFNLFLAWFLTSFSIGRAIVDGAAAGFNELMKVAYVGIEFAVPSMVKVKQMDWFVSVLLPILMIVPLFDILTYIGILPWVIKWIGRGLSWLTGQPKFESFFAIEMMFLGNTEALAISSLQLKQMKAERNLTLAMMSMSCVTASIIGAYTQMMPGSYILTAVPVNVINALIVTSMLNPVTVTKEEDTVATMKGSAAAETEVGDVDAEGNAVKEPFFSFLGDSILGAGRLVLIIAANVIAFVALAALIDKLLGYINPWLSLEHILGIVMFPFAWLTGLNVQDSFQFAQYMGMKLVTNEFVVMGKVTGTISTHAFNPHYRAMLTVFLTSFANFSTIGMIIGCFKGIVNKEKNDLISKNVGYMLVSGILVSLLSAAMVGLFVW GT:EXON 1|1-415:0| BL:SWS:NREP 1 BL:SWS:REP 1->415|NUPG_BACSU|1e-66|38.5|397/397| TM:NTM 9 TM:REGION 1->22| TM:REGION 34->56| TM:REGION 62->83| TM:REGION 94->116| TM:REGION 193->215| TM:REGION 259->281| TM:REGION 293->315| TM:REGION 355->377| TM:REGION 391->413| SEG 264->282|lvliiaanviafvalaali| RP:PFM:NREP 2 RP:PFM:REP 8->76|PF01773|2e-09|39.1|69/75|Nucleos_tra2_N| RP:PFM:REP 285->414|PF07662|4e-16|43.0|128/211|Nucleos_tra2_C| HM:PFM:NREP 2 HM:PFM:REP 192->414|PF07662|3.8e-51|37.0|200/208|Nucleos_tra2_C| HM:PFM:REP 8->81|PF01773|1.1e-23|35.1|74/75|Nucleos_tra2_N| GO:PFM:NREP 3 GO:PFM GO:0005415|"GO:nucleoside:sodium symporter activity"|PF01773|IPR002668| GO:PFM GO:0006810|"GO:transport"|PF01773|IPR002668| GO:PFM GO:0016020|"GO:membrane"|PF01773|IPR002668| OP:NHOMO 700 OP:NHOMOORG 378 OP:PATTERN -------------------------------------------------------------------- 11---1------1------------------------------------------1----------1---------------------------------1----1-11----------------------------------------------------------111----------------------13777776775777767113313778---1111------2-23333333333333322222--1----1---1111--311111---111------------------1111111111111---------------1111111111----2222-1-1-------------------------1---1-----1-111-----11-------------11-11-11-------------------11-------------------111----------------------------------11-11------11-1--1-11--1-1111-11-1---------------------------1-----------------------1---------------------------------1-1111111-------53-1--111111222211511111362124-------------23112223332323232-323333234332333333332333222121-1111111111-1423233331-32222221222211--------------2-11111111111111-------1----------------------222222222-33333333323333--1-1---11-------------------------------------------------------------1- ------------111111-11111111------11111-1111111--11111-1111-1111-1---------1------11111------111--------211----2-----------1-11-------------11-111-1---1---------2--131--21-1--2------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 226-233| PSIPRED cHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //