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Lactobacillus salivarius UCC118 (lsal0)
Gene : oppC
DDBJ      :oppC         Oligopeptide transport system permease protein
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  779/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:342 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  118->336 2r6gG1  f.58.1.1 * 4e-27 10.6 %
:RPS:PFM   202->341 PF00528 * BPD_transp_1 2e-04 27.1 %
:HMM:PFM   158->342 PF00528 * BPD_transp_1 4e-35 25.9 174/185  
:BLT:SWISS 12->342 OPPC_BACSU 9e-55 46.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00499.1 GT:GENE oppC GT:PRODUCT Oligopeptide transport system permease protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1777130..1778158) GB:FROM 1777130 GB:TO 1778158 GB:DIRECTION - GB:GENE oppC GB:PRODUCT Oligopeptide transport system permease protein GB:NOTE COG0601 [EP] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components GB:PROTEIN_ID ABE00499.1 GB:DB_XREF GI:90821860 GB:GENE:GENE oppC LENGTH 342 SQ:AASEQ MEEKLKLSPDSFEPLAKGEAQDNEKIAAPSLTFTQDVWLRLKKNKGAVVSLIVILLMVIVAFGSTPFINKSTLVKSQPQYANLPAKVPGLDAINGLNGKIKQGGVWVDAYAKNDVPKDKYFYLGTDYLGRSLAQRIIYGTKVSLIVALVATFFDLTVGVAYGIISGWKGGRVDNVMQRIIEIISSIPNLVIVVLMLVVLKPGMTSIILAIAISSWTTMARMIRAETLSLKTQEYVLAARTLGESPTKIAWKHLVPNLSSIIIIQTMYTIPSAIFFEAFLSFIGIGITAPETSLGVLLNEGQKNFQFLPYQMWYPAIVLCVLMIAFNLLGDGLRDAFDPKTRR GT:EXON 1|1-342:0| BL:SWS:NREP 1 BL:SWS:REP 12->342|OPPC_BACSU|9e-55|46.8|297/305| TM:NTM 5 TM:REGION 46->67| TM:REGION 142->164| TM:REGION 184->206| TM:REGION 266->287| TM:REGION 311->333| SEG 48->60|vvslivillmviv| SEG 189->199|lvivvlmlvvl| RP:PFM:NREP 1 RP:PFM:REP 202->341|PF00528|2e-04|27.1|133/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 158->342|PF00528|4e-35|25.9|174/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 118->336|2r6gG1|4e-27|10.6|217/284|f.58.1.1| OP:NHOMO 3541 OP:NHOMOORG 841 OP:PATTERN 4441313244444443333332113336425212---1-----113-52-DA5-54433133213-11 1114D443344-4113322-2311292222224333276816286DA4344379732411552385677A33222722323-411111--------2--------11--122222222222222211111111121466952216A33223332222------32115322--11-11---11A5433781423666664564546445A76663655324C521222222E6155555555655556333222222331-12111--33111112234333333311112211111112222222222222231133211111C36244434541422222111153153C-111BA631-282-3362174311----1121132HHP115854B1AAAAA997AAL-44C43A4DQO1-mRRWIIEWTLOPK4-115BDA6AA6CC1111111123322219--------------------------------1-1CFCBC68878654555559955552566E64A7113342353343C5DR241132242-------111211346132352233331111111211----14111111------112212221113-1211553121111151111111111111111121--13321------76JD4977777777777-7777777777777777776ABACA3366666666666656566877667574-666666666666--111-1-1111111747333-2222221312322222121234233233658255442ABA1----1---256666666656688--1-------------12111111111111117-111211-222212122212212111143754AEA88212 --------------------------------------------------------------------------------------------------------------------------------------------------------------1----2------1--1---1-------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4,15-29,341-343| PSIPRED ccccccccHHHHHccccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccccccccccEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHccc //