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Lactobacillus salivarius UCC118 (lsal0)
Gene : pepC
DDBJ      :pepC         Aminopeptidase C
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  101/915 : Eukaryota  125/199 : Viruses  0/175   --->[See Alignment]
d.3.1
:444 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->444 1cb5A PDBj 1e-98 39.6 %
:RPS:PDB   28->444 1cb5A PDBj 3e-53 39.7 %
:RPS:SCOP  151->423 1deuA  d.3.1.1 * 1e-18 12.5 %
:HMM:SCOP  1->444 3gcbA_ d.3.1.1 * 1.4e-146 42.1 %
:RPS:PFM   8->440 PF03051 * Peptidase_C1_2 e-164 63.0 %
:HMM:PFM   5->441 PF03051 * Peptidase_C1_2 1.1e-201 57.8 436/438  
:BLT:SWISS 1->444 PEPC_LACDL e-155 56.7 %
:PROS 64->75|PS00139|THIOL_PROTEASE_CYS
:PROS 363->373|PS00639|THIOL_PROTEASE_HIS

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00060.1 GT:GENE pepC GT:PRODUCT Aminopeptidase C GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 1282931..1284265 GB:FROM 1282931 GB:TO 1284265 GB:DIRECTION + GB:GENE pepC GB:PRODUCT Aminopeptidase C GB:NOTE COG3579 [E] Aminopeptidase C GB:PROTEIN_ID ABE00060.1 GB:DB_XREF GI:90821421 GB:GENE:GENE pepC LENGTH 444 SQ:AASEQ MSEAISSEQLSKFHQLIEDDPKSRVLERAVSKNGILTTSADFHSEVNMDPVFSIDLDTGDVANQKQSGRCWMFAALNTMRHDLKNRFGVAKDFELSQSYTFFWDKLEKSNYFYENVIKTASLPTSDRKVSWLMTTPQQDGGQWDMITAIIRKYGVVPKSVMPESYNSSKSNELNSTLNLKLRKDAVDLRELVNSNASSEEVASFKEKKLAEIYRILVYTLGEPPVKFDFEYRDSDNNYHIDQDLTPQTFFEKYVNWNLDDYVSIINAPTDDKPYNHMYTIEMLGNVLGEREVRHLNVDMNTFRQVAIKQLESGESVWFGCDVGQESDRKKGIMDTELYHKDELFDVDFSMSKAERLDYSESLMTHAMVLTGVDLVNGTPTKWKVENSWGDKVGTKGFFVMSNNWMEEYCYQVVVNKKFLPEELQKVLTEEPKVLAPWDPMGSLA GT:EXON 1|1-444:0| BL:SWS:NREP 1 BL:SWS:REP 1->444|PEPC_LACDL|e-155|56.7|443/449| PROS 64->75|PS00139|THIOL_PROTEASE_CYS|PDOC00126| PROS 363->373|PS00639|THIOL_PROTEASE_HIS|PDOC00126| BL:PDB:NREP 1 BL:PDB:REP 2->444|1cb5A|1e-98|39.6|442/453| RP:PDB:NREP 1 RP:PDB:REP 28->444|1cb5A|3e-53|39.7|416/453| RP:PFM:NREP 1 RP:PFM:REP 8->440|PF03051|e-164|63.0|430/435|Peptidase_C1_2| HM:PFM:NREP 1 HM:PFM:REP 5->441|PF03051|1.1e-201|57.8|436/438|Peptidase_C1_2| GO:PFM:NREP 2 GO:PFM GO:0004197|"GO:cysteine-type endopeptidase activity"|PF03051|IPR004134| GO:PFM GO:0006508|"GO:proteolysis"|PF03051|IPR004134| RP:SCP:NREP 1 RP:SCP:REP 151->423|1deuA|1e-18|12.5|255/275|d.3.1.1| HM:SCP:REP 1->444|3gcbA_|1.4e-146|42.1|439/458|d.3.1.1|1/1|Cysteine proteinases| OP:NHOMO 298 OP:NHOMOORG 226 OP:PATTERN -------------------------------------------------------------------- ------------2--------------------------------------------1-------------22222222---------1111-111------1------1-------------------------------------------------------------------------------------------------------------------111111----------------------14232231446222222211-1211111111111111111111111111111111111111111111111--------------------------1---1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------1--12------2------------------- ------1--------11111---1111111111111-------11111111111111--11122-1--1-111-1-1-12111111---1311112---1211211-1--1121311111111111111291-11411111111111111111111111------134124--11--------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 444 STR:RPRED 100.0 SQ:SECSTR HHHcccHHHHHHHHHHHHTcHHHHHHHHHHTTccHHHHHccHHHHHHccccccEEcccccccccccccTHHHHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHHHHHHHHTccTTcHHHHHHHHcTTcccccHHHHHHHHHHHccccGGGccccTGGGccHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcTTccEEEEEEEcHHHHHHHHTTccGGGEEEEEccccTTccccEEEEETTccccTTccccEEEEccHHHHHHHHHHHHHTTccEEEEEcTTTTEETTTTEEcTTcccHHHHHcccccccHHHHHHTTcccccEEEEEEEEEEcTTccccEEEEccccTTcTcTTEEEEEHHHHHHHEEEEEEEGGGccHHHHGGGGcccEEEcTTcGGGccc DISOP:02AL 1-2| PSIPRED ccccccHHHHHHHHHHHHHcHHHHHHHHHHHHccHHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccHHHHHHHHHHcccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccEEccccccHHHHHHHHccccHHHEEEEEEccccccccccEEEEEccccccccccEEEEcccHHHHHHHHHHHHHccccEEEEccccccccccccHHHHHHHcHHHHccccccccHHHHHHHcccccccEEEEEEEEEEcccEEEEEEEEccccccccccEEEEEHHHHHHHHHEEEEEHHHccHHHHHHHccccEEccccccccccc //