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Lactobacillus salivarius UCC118 (lsal0)
Gene : pilD
DDBJ      :pilD         Type IV prepilin leader peptidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  144/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:218 amino acids
:PSIPRED
:RPS:PFM   10->84 PF06750 * DiS_P_DiS 9e-12 37.3 %
:HMM:PFM   10->92 PF06750 * DiS_P_DiS 1.9e-27 37.3 83/92  
:HMM:PFM   103->202 PF01478 * Peptidase_A24 1.8e-06 21.0 100/106  
:BLT:SWISS 12->83 LEP4_SYNY3 3e-11 34.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99014.1 GT:GENE pilD GT:PRODUCT Type IV prepilin leader peptidase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(242423..243079) GB:FROM 242423 GB:TO 243079 GB:DIRECTION - GB:GENE pilD GB:PRODUCT Type IV prepilin leader peptidase GB:NOTE COG1989 [NOU] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases GB:PROTEIN_ID ABD99014.1 GB:DB_XREF GI:90820375 GB:GENE:GENE pilD LENGTH 218 SQ:AASEQ MIYIFFLLFILGTCLGSFISCVAYRYKLGISIIYPRSFCDNCSQTLQHWQLIPIIGFILQKGKCHFCKQKIPLSSTVIELAIGVIFIFNTIIIANTNLIFTSLLVVWLTLISLEDYYTLSVDSITLEYGGLILLIFRFHTVITNLKANFLIIILFIIILISCNLLNKFGTADTILIVFSFLLLGFYNTLVVILLSCILGIISYLIKRDFSASHPLFHI GT:EXON 1|1-218:0| BL:SWS:NREP 1 BL:SWS:REP 12->83|LEP4_SYNY3|3e-11|34.7|72/269| TM:NTM 5 TM:REGION 2->24| TM:REGION 82->104| TM:REGION 119->141| TM:REGION 145->167| TM:REGION 170->192| SEG 85->101|ififntiiiantnlift| SEG 149->160|fliiilfiiili| RP:PFM:NREP 1 RP:PFM:REP 10->84|PF06750|9e-12|37.3|75/95|DiS_P_DiS| HM:PFM:NREP 2 HM:PFM:REP 10->92|PF06750|1.9e-27|37.3|83/92|DiS_P_DiS| HM:PFM:REP 103->202|PF01478|1.8e-06|21.0|100/106|Peptidase_A24| OP:NHOMO 145 OP:NHOMOORG 144 OP:PATTERN -------------------------------------------------------------------- -1---------------------------------------------------------------------------------1-111-------------------------------------------------------1--1---11-11-------111--1111----1-1---1----1111-11-1111111111111111-11--1111--1111-------1--------------------111------111111--11-----11--------11------------------------11111-11111-1-111111111111-111----11---1-1111211-1-1111111---1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-11--1--1---1-----11-1-----1-11-11-1111-1----------1-111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--111-111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc //