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Lactobacillus salivarius UCC118 (lsal0)
Gene : proS
DDBJ      :proS         Prolyl-tRNA synthetase
Swiss-Prot:SYP_LACS1    RecName: Full=Prolyl-tRNA synthetase;         EC=6.1.1.15;AltName: Full=Proline--tRNA ligase;         Short=ProRS;

Homologs  Archaea  46/68 : Bacteria  869/915 : Eukaryota  157/199 : Viruses  0/175   --->[See Alignment]
c.51.1d.104.1d.116.1
:571 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->568 2j3lB PDBj 0.0 65.8 %
:RPS:PDB   8->492 1c0aA PDBj 4e-51 12.9 %
:RPS:SCOP  31->219 1evkA2  d.104.1.1 * 2e-47 19.3 %
:RPS:SCOP  253->386 1wdvA  d.116.1.1 * 2e-22 19.7 %
:RPS:SCOP  397->459 1h4qA2  d.104.1.1 * 2e-07 19.0 %
:RPS:SCOP  462->567 1g5hA1  c.51.1.1 * 6e-22 11.3 %
:HMM:SCOP  9->475 1atiA2 d.104.1.1 * 3.1e-98 40.7 %
:HMM:SCOP  460->567 1nj1A1 c.51.1.1 * 8.3e-29 39.8 %
:RPS:PFM   49->191 PF00587 * tRNA-synt_2b 8e-17 33.1 %
:RPS:PFM   257->373 PF04073 * YbaK 3e-22 47.0 %
:RPS:PFM   475->564 PF03129 * HGTP_anticodon 3e-08 36.8 %
:HMM:PFM   51->214 PF00587 * tRNA-synt_2b 1.9e-38 25.8 163/173  
:HMM:PFM   257->371 PF04073 * YbaK 1.7e-28 38.3 115/123  
:HMM:PFM   473->562 PF03129 * HGTP_anticodon 2e-21 36.7 90/94  
:BLT:SWISS 1->571 SYP_LACS1 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99375.1 GT:GENE proS GT:PRODUCT Prolyl-tRNA synthetase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 604579..606294 GB:FROM 604579 GB:TO 606294 GB:DIRECTION + GB:GENE proS GB:PRODUCT Prolyl-tRNA synthetase GB:NOTE COG0442 [J] Prolyl-tRNA synthetase GB:PROTEIN_ID ABD99375.1 GB:DB_XREF GI:90820736 GB:GENE:GENE proS LENGTH 571 SQ:AASEQ MKQSQMLIPTLKEIPSDAEVVSHQLMLRGGYIKQITAGMYAYLPLAYRVMKKIENIIREEMDRIDAVEMLVPAVVPAELWQESGRYETYGPTLFKLKDRHERDFILGPTHEETFTTIVRDAIKSYKKLPLYLYQIQMKYRDENRPRFGLLRGREFLMLDGYSFHVDDASMEKVFNDTDKAYQRIFERCGLDFRGIIADSGAMGGNRSKEFQAIAEVGEDTIAYSDSSDYAANIEMAKNLRIPKQSHETPKDLEKVATPNAKTIVEVAEFLGTDTQNEIKTLLFIADDEPVVVLMRGIDEVNEVKLKNHLGAIDLRPAEEEEAVKFLGANFGSLGPVGIDENLKVLADLDVEGMINASVGANEDGYHYINVNIDRDYHVDEFLDLREVREGELSPDGEGVLKFTRGIEIGHIFQLGTRYSESLGADVLDENGRQVPMRMGCYGIGVSRLLSAIVEQHNDENGIAWPREIAPFDIHVVPVNVKNDTQRELSEKVTAMLEDAGYQVLVDDRKERAGVKFADSDLIGLPIRITVGKKADEGIVEIKLRQNGEKIEVKLEELLNSVKILFNETITD GT:EXON 1|1-571:0| SW:ID SYP_LACS1 SW:DE RecName: Full=Prolyl-tRNA synthetase; EC=6.1.1.15;AltName: Full=Proline--tRNA ligase; Short=ProRS; SW:GN Name=proS; OrderedLocusNames=LSL_0566; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->571|SYP_LACS1|0.0|100.0|571/571| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| BL:PDB:NREP 1 BL:PDB:REP 1->568|2j3lB|0.0|65.8|568/570| RP:PDB:NREP 1 RP:PDB:REP 8->492|1c0aA|4e-51|12.9|466/585| RP:PFM:NREP 3 RP:PFM:REP 49->191|PF00587|8e-17|33.1|142/170|tRNA-synt_2b| RP:PFM:REP 257->373|PF04073|3e-22|47.0|117/122|YbaK| RP:PFM:REP 475->564|PF03129|3e-08|36.8|87/91|HGTP_anticodon| HM:PFM:NREP 3 HM:PFM:REP 51->214|PF00587|1.9e-38|25.8|163/173|tRNA-synt_2b| HM:PFM:REP 257->371|PF04073|1.7e-28|38.3|115/123|YbaK| HM:PFM:REP 473->562|PF03129|2e-21|36.7|90/94|HGTP_anticodon| GO:PFM:NREP 9 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03129|IPR004154| GO:PFM GO:0005524|"GO:ATP binding"|PF03129|IPR004154| GO:PFM GO:0006412|"GO:translation"|PF03129|IPR004154| RP:SCP:NREP 4 RP:SCP:REP 31->219|1evkA2|2e-47|19.3|187/291|d.104.1.1| RP:SCP:REP 253->386|1wdvA|2e-22|19.7|132/150|d.116.1.1| RP:SCP:REP 397->459|1h4qA2|2e-07|19.0|62/264|d.104.1.1| RP:SCP:REP 462->567|1g5hA1|6e-22|11.3|106/127|c.51.1.1| HM:SCP:REP 9->475|1atiA2|3.1e-98|40.7|300/394|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 460->567|1nj1A1|8.3e-29|39.8|108/127|c.51.1.1|1/1|Class II aaRS ABD-related| OP:NHOMO 1197 OP:NHOMOORG 1072 OP:PATTERN 1111121---------12111111-1111111111--111111111-111---111111--1---1-1 1111211111111111111-11--1111111111111111111111111111111111112111111111111111111111-1111111111111-111111111111111111111111111---1-1111111122111112-1111111111111111111111111211222212212111--11111111111111211111111112111111121111111112311111111111111111111111111111111111111111112221111111211222222222221111111111111211111111121111111111112111111111111111211111111111111111111-1-11111111121121111111111111111111111111111111111111111111111111111111111111111111111111-22112111111111111111111111111111-11-1111111111111222211212222221112222111121111111111111111112111111111211111---111111111111111111111111--111111111111111111111111111112211211112211111111111111111112-1112111211111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111211111111112311111111111111111111111111111111111112111111111222222221111111111111111111111111111121111111111--1--1-11111111--1-11---1-1--------1111111111-1- 21--221-2-----111111111111111111111112-1111122111122121111122221111112122111111112223211----1-------111111-1-21-21111111111122111121-111-1--11111----11--1-111211111112111-12-2--11-111111113111--3211- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 570 STR:RPRED 99.8 SQ:SECSTR cccEEEEEEEEEccccccccTTccccHHHHHHTHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHTTcEEccccccccccccEEEEcTTccccccEEEccccTTcEEEcccccHHHHHHccccEEHHHTTccEEEEEEEEEcccccHcccTTcccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccccccEEEHHHHHHHHccccccTTccccEEEcHHHHTTcccHHHHHHHHcTTEEEEEEEETTGGGccHHHHHHHHHHHHHTTcccccEEEEcGGGGGGGEEcTTGGGccHHHHHHHHHHTTcTcEEEEEEEEHHHHHHHHHHHHHHHHHHTTccccccccEEEEEccccEEEcccccEEEcccTTcccccccHHHHccHHccTTccccEEEEEETTEEEEEEEEccccHHHHHHHHHHHHHTTTTcccEEEEEEEHHHHHHHHHTcccGGGGccccccTTcccTTTTccccccHHHHHTTcccHHHHTHTTccEEEccccccHHHHHHHHHHTTccEEEEEcHHHHHTEEEEEETTTccEEEEETTHHHHHHHHHHcccHc# DISOP:02AL 1-1,570-572| PSIPRED ccccHHHHHHHHHcHHHHccccHHHHHHHHcEEEcccccEEEcccHHHHHHHHHHHHHHHHHHcccEEEEcccEEcHHHHHHccccccccHHHcccccccccEEEEccccHHHHHHHHHHccccHHHccEEEHHcccEEccccccccccEEEEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccEEEEEEccccccEEEEEcccccHHHHHHHHHcccccccccccccEEEEEccccccHHHHHHHccccHHHEEEEEEEEEcccEEEEEEcccccccHHHHHHHccccccEEccHHHHHHHccccccEEcccccccccEEEEcccccccccEEEcccccccEEEEcccccccccccEEEHHHHcccccccccccccccccEEEEEEEEEEcccccHHcccEEEcccccEEEEEEEEccccHHHHHHHHHHHHccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHccccEEEEEcHHHHcccEEEEEcccccEEEEEHHHHHHHHHHHHHHHHcc //