[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : purK.1
DDBJ      :purK         Phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit
Swiss-Prot:             

Homologs  Archaea  45/68 : Bacteria  725/915 : Eukaryota  122/199 : Viruses  0/175   --->[See Alignment]
b.84.2c.30.1d.142.1
:373 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   72->367 3ethA PDBj 1e-35 32.3 %
:RPS:PDB   26->275 3d2oA PDBj 1e-49 7.0 %
:RPS:SCOP  106->352 1a9xA5  d.142.1.2 * 8e-34 14.8 %
:HMM:SCOP  10->105 1eyzA2 c.30.1.1 * 6.6e-26 47.9 %
:HMM:SCOP  106->306 1b6rA3 d.142.1.2 * 9.4e-63 41.9 %
:HMM:SCOP  307->372 1b6rA1 b.84.2.1 * 4.9e-15 43.5 %
:RPS:PFM   118->283 PF02222 * ATP-grasp 1e-43 48.8 %
:HMM:PFM   114->284 PF02222 * ATP-grasp 3.4e-59 42.7 171/172  
:HMM:PFM   6->75 PF02826 * 2-Hacid_dh_C 3.3e-09 34.4 64/178  
:BLT:SWISS 26->362 PURK_STAAW 2e-91 46.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99325.1 GT:GENE purK.1 GT:PRODUCT Phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 561083..562204 GB:FROM 561083 GB:TO 562204 GB:DIRECTION + GB:GENE purK GB:PRODUCT Phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit GB:NOTE COG0026 [F] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) GB:PROTEIN_ID ABD99325.1 GB:DB_XREF GI:90820686 GB:GENE:GENE purK LENGTH 373 SQ:AASEQ MDSMIMQGKTIGIIGGGQLGQMLSFSAKKAGMRVIILDPNPTCSAGQVSDEQIVAPYDDIEAIEELADKADVLTYEFENVDLNALENVSSKVEIPQGTELLRITKDRIREKTFLQKSGLKVAPFAEINKFSDLEKKINEIGYPAILKTCEGGYDGKGQLVLNSEKDLVEADEIIKLGQCILEGKINFQMECSVMVGRNLRGEITVFPVSENIHRNQILHESIVPARISSELQEKAKETAVKVAESLNLCGILGIEMFIGEDNEIYINELAPRPHNSGHYSIEACNFSQFDIHNRAICNWPLPKIELLKPVVMVNVLGQHVEKTQELISKKPTWQFHDYGKGEIRVDRKMGHVTILTDDINKTLDEIVSTHVWD GT:EXON 1|1-373:0| BL:SWS:NREP 1 BL:SWS:REP 26->362|PURK_STAAW|2e-91|46.9|335/374| SEG 4->22|mimqgktigiigggqlgqm| BL:PDB:NREP 1 BL:PDB:REP 72->367|3ethA|1e-35|32.3|288/355| RP:PDB:NREP 1 RP:PDB:REP 26->275|3d2oA|1e-49|7.0|228/244| RP:PFM:NREP 1 RP:PFM:REP 118->283|PF02222|1e-43|48.8|166/171|ATP-grasp| HM:PFM:NREP 2 HM:PFM:REP 114->284|PF02222|3.4e-59|42.7|171/172|ATP-grasp| HM:PFM:REP 6->75|PF02826|3.3e-09|34.4|64/178|2-Hacid_dh_C| RP:SCP:NREP 1 RP:SCP:REP 106->352|1a9xA5|8e-34|14.8|244/275|d.142.1.2| HM:SCP:REP 10->105|1eyzA2|6.6e-26|47.9|96/111|c.30.1.1|1/1|PreATP-grasp domain| HM:SCP:REP 106->306|1b6rA3|9.4e-63|41.9|198/198|d.142.1.2|1/1|Glutathione synthetase ATP-binding domain-like| HM:SCP:REP 307->372|1b6rA1|4.9e-15|43.5|62/79|b.84.2.1|1/1|Rudiment single hybrid motif| OP:NHOMO 1238 OP:NHOMOORG 892 OP:PATTERN --11--2222222222-211111-11112111---11111111-----------12112-2111--11 1-11122222222231111-121112111111311112221---1111111111111111111111111112222222----1121221112-1-----11221111111---------------11-111---1111111---11211211111222222222211222122222222222211111---1121111111111111111111121111111111111111121111111111111111111121112212-1-22222222211111111111111111111111111111111111111111111111111111--------------11---------1---1-------1--11-1---1-1111211111111111111111111111111111-11111111112111111111111111111111111111111111111111111211111111111---------------212112121122222222222122222222222222222222211111212111222212122222221111111111123------21-11111-11111-11111-111--1-------------------11211222221211111222222121222212112111-1-112------22222222221222222-22222222222222222212222211222222222222222222223222222222222222222--12-----111122211222222211111222222222211121222222222222222223333333332222122222222222222222222111111--222222------------------------------------1----1-1111-- ----111-----1111111111111111111211111111111111111111111111111111111111111111111111111111-1111111111111111--12------------------------------------------------------1---------1--11181111121121121111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 345 STR:RPRED 92.5 SQ:SECSTR ######################HHHcEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEcTTcccTHHHHHHHHHccccccHHHHHHHHHHHHTTccEEEEEEEEEEEEEEEcTHTTccEEEEEEEEEEEEEEETTEEEEEEEEEEEEEccEEcHHHHHHccccccEEEEEEEcccEEEEEcccccHHHHHHHHEEEcTTHTTccEEccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcTTEEEEEEEEEETETTEEEEEccTTccccTHHHHHHHHcccHHHHHHHHHTTccTTcTTTccccGGGcccccEEEccccTTEEEEEccccccccccTTcccccEEEEEEEccHHHHHHHHc###### DISOP:02AL 1-2,4-7| PSIPRED cccEEccccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccccHHHHHccEEEEcccccHHHHHHHHHHccEEEEccccccHHHHHHHccccEEcccHHHHHHHHcHHHHHHHHHHccccccccEEcccHHHHHHHHHHccccEEEEEcccccccccEEEEccHHHHHHHHHHcccccEEEEEcccccEEEEEEEEcccccEEEEEcccccEEEccEEEEEEccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEccccEEEEEEcccccccEEEEEEEccccHHHHHHHHHcccccccccccccEEEEEEEccccccHHHHHHccccccEEEccccccccccEEEEEEEEcccHHHHHHHHHHccccc //