[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : queA
DDBJ      :queA         S-adenosylmethionine tRNA ribosyltransferase-isomerase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  754/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
e.53.1
:347 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->346 1yy3A PDBj e-119 64.2 %
:RPS:PDB   61->159 3cykB PDBj 5e-18 23.7 %
:RPS:PDB   143->234 1aqyA PDBj 9e-13 14.3 %
:RPS:SCOP  10->346 1vkyA  e.53.1.1 * e-113 46.4 %
:HMM:SCOP  6->347 1wdiA_ e.53.1.1 * 6.4e-133 56.5 %
:RPS:PFM   10->219 PF02547 * Queuosine_synth 3e-67 59.1 %
:HMM:PFM   7->220 PF02547 * Queuosine_synth 3.9e-85 56.1 212/220  
:BLT:SWISS 6->347 QUEA_PEDPA e-171 82.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99932.1 GT:GENE queA GT:PRODUCT S-adenosylmethionine tRNA ribosyltransferase-isomerase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1152457..1153500) GB:FROM 1152457 GB:TO 1153500 GB:DIRECTION - GB:GENE queA GB:PRODUCT S-adenosylmethionine tRNA ribosyltransferase-isomerase GB:NOTE COG0809 [J] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) GB:PROTEIN_ID ABD99932.1 GB:DB_XREF GI:90821293 GB:GENE:GENE queA LENGTH 347 SQ:AASEQ MSEKHLTTEDFDYDLPESLIAQTPLEERDQSRMLILDSKTGEYQDDYFYNVIDQLNPGDALVMNDSRVMPARIYGVKPETGGHVEVLLLNNTHGDEWETLVKPARRAKVGTKISFGDGALKATVTKELEHGGRLIEFEYDGIFMEILDKLGEMPLPPYIKEKLENPEMYQTVYSREVGSAAAPTAGLHFTKELLHKIEEKGVKLVYLTLHVGLGTFRPVSEKNIEDHKMHSEFYRLTEEAAATLNEVRKNGGRIVATGTTSIRTLETIGTKYNGEIKADSGWTDIFIKPGYEWKVVQAFITNFHLPKSTLVMLVASFTGRENILNAYKHAVEEKYRFFSFGDAMFIK GT:EXON 1|1-347:0| BL:SWS:NREP 1 BL:SWS:REP 6->347|QUEA_PEDPA|e-171|82.5|342/344| BL:PDB:NREP 1 BL:PDB:REP 11->346|1yy3A|e-119|64.2|313/315| RP:PDB:NREP 2 RP:PDB:REP 61->159|3cykB|5e-18|23.7|76/115| RP:PDB:REP 143->234|1aqyA|9e-13|14.3|91/283| RP:PFM:NREP 1 RP:PFM:REP 10->219|PF02547|3e-67|59.1|208/217|Queuosine_synth| HM:PFM:NREP 1 HM:PFM:REP 7->220|PF02547|3.9e-85|56.1|212/220|Queuosine_synth| GO:PFM:NREP 3 GO:PFM GO:0008616|"GO:queuosine biosynthetic process"|PF02547|IPR003699| GO:PFM GO:0016740|"GO:transferase activity"|PF02547|IPR003699| GO:PFM GO:0016853|"GO:isomerase activity"|PF02547|IPR003699| RP:SCP:NREP 1 RP:SCP:REP 10->346|1vkyA|e-113|46.4|278/280|e.53.1.1| HM:SCP:REP 6->347|1wdiA_|6.4e-133|56.5|338/0|e.53.1.1|1/1|QueA-like| OP:NHOMO 798 OP:NHOMOORG 762 OP:PATTERN -------------------------------------------------------------------- 11111---------------------------------11---------------------------1----------1111211111222212221--11111112211---------------22222222222-----11121111111111111111111111111111111111111111111111111111111111111111221111111111111111111111111111111111111111111-1-11-----11--111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-----111111111111111111111111-11111111111111112111111111-11111111111111111111111111-1------------1111111-11111-----1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111-111111--11111111111111111111-1111111111111111111111111112111122222122211111111111-1111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111-1-------------------------1111111111111 ------------------------1-1------1-----------------------1----------------------------------------------------------------------------------------------------------------2----1------------1---------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 338 STR:RPRED 97.4 SQ:SECSTR ########GTccccccTTTccccccTTcTTccEEEccTTTcccccccTTGGGGGccTTEEEEEETTTTEEcEEEEEEccccTTcEEEEEEEcTTccEEEEETTGGGccTEEEEccTTcEEcccccTTcccEEEEEEEEcTTTTHHHETTTTccccccEETTTTHHHHTccHccTTcEEEEEcTTccHHHHHHHHHHHHTTTccccHHHHcccTTcEETTTEEHHHHHHTcccccEEcHHHHHHHHHHHHTTccEEEEcTTTHHHHHHHHHTTTcccccEEEEEcccccTTcccccccEEEEEcccTTccHHHHHHHHHcHHHHHHHHHHHHHTTccccccccEEEc# DISOP:02AL 1-3| PSIPRED ccHHHccHHHccccccHHHHcccccccccccEEEEEEccccEEEEEEHHHHHHHcccccEEEEEcccEEEEEEEEEEcccccEEEEEEEEEEcccEEEEEEccccccccccEEEEccccEEEEEEEEccccEEEEEEccccHHHHHHHHHcccccccccccccccccccccHHccccccHHcccccccccHHHHHHHHHcccEEEEEEEEcccccccccEEccccccccccEEEEccHHHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHccccEEEccccEEEEEccccEEEEEEEEEccccccHHHHHHHHHHHHcHHHHHHHHHHHHHccccEEEEcccEEcc //