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Lactobacillus salivarius UCC118 (lsal0)
Gene : rbsK
DDBJ      :rbsK         Ribokinase
Swiss-Prot:             

Homologs  Archaea  42/68 : Bacteria  553/915 : Eukaryota  176/199 : Viruses  0/175   --->[See Alignment]
c.72.1
:307 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->305 1rkdA PDBj 4e-57 40.7 %
:RPS:PDB   3->306 2c4eA PDBj 2e-57 21.2 %
:RPS:SCOP  4->304 2fv7A1  c.72.1.1 * 2e-75 35.5 %
:HMM:SCOP  2->305 2fv7A1 c.72.1.1 * 2.5e-80 38.0 %
:RPS:PFM   7->290 PF00294 * PfkB 6e-35 36.5 %
:HMM:PFM   3->295 PF00294 * PfkB 7.5e-66 34.5 287/300  
:BLT:SWISS 2->305 RBSK_ECOLI 1e-56 40.7 %
:PROS 247->260|PS00584|PFKB_KINASES_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99233.1 GT:GENE rbsK GT:PRODUCT Ribokinase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 466078..467001 GB:FROM 466078 GB:TO 467001 GB:DIRECTION + GB:GENE rbsK GB:PRODUCT Ribokinase GB:NOTE COG0524 [G] Sugar kinases, ribokinase family GB:PROTEIN_ID ABD99233.1 GB:DB_XREF GI:90820594 GB:GENE:GENE rbsK LENGTH 307 SQ:AASEQ MSNKVTVLGSLNVDTILRIPRLPQPGETLKMDDIGVAGGGKGANQAISAARSKSHVTFIGGVGNDVQGEMMLKLLKEDGININNVAKLNEGTGQAFILLQESGENSIVIYGGANQAIKTTVIQNAMNDIKDSDFLVAQFETPLEVTNEAFKLARELNVKTILNPAPATDILDELKKNIDLIIPNETEAELLTGIKVVDEDTCRQAADKLIDQGINNVIITLGKQGAYYKTKDGVCELVPAFKVKAIDTTAAGDTFIGALVSKLDTSFSNLREAIIYASKASSLAVQRLGAIPSIPYKDDVEKQLNSK GT:EXON 1|1-307:0| BL:SWS:NREP 1 BL:SWS:REP 2->305|RBSK_ECOLI|1e-56|40.7|302/309| PROS 247->260|PS00584|PFKB_KINASES_2|PDOC00504| BL:PDB:NREP 1 BL:PDB:REP 2->305|1rkdA|4e-57|40.7|302/306| RP:PDB:NREP 1 RP:PDB:REP 3->306|2c4eA|2e-57|21.2|293/299| RP:PFM:NREP 1 RP:PFM:REP 7->290|PF00294|6e-35|36.5|277/295|PfkB| HM:PFM:NREP 1 HM:PFM:REP 3->295|PF00294|7.5e-66|34.5|287/300|PfkB| RP:SCP:NREP 1 RP:SCP:REP 4->304|2fv7A1|2e-75|35.5|301/308|c.72.1.1| HM:SCP:REP 2->305|2fv7A1|2.5e-80|38.0|303/0|c.72.1.1|1/1|Ribokinase-like| OP:NHOMO 1595 OP:NHOMOORG 771 OP:PATTERN 112-21211111112221111111---11---1132-1-11------------11111111---1--1 1-2-121122211111111-11---111111-1111121112--121----1212--1--1132-321131111121231-12-----1131-3-----111-11-13-1---------------11---111-1122112---21122211-11-----1-----222221---11------132---1-2222222221112212115333242211243333-2222134232333333333333223222321112323323221121213322111111-1------------------------------------212124444343444723--334433-211-21----1--511134211-31-2111------1-212---2----1111111-113---2--1--14--334432454311--1111423132321--------21111-11-----------------------------1----------4444433111133353333235341111--112--1----2-13----1--11--------------2--1-1---1-------1--1-------111---------------------------2252---12-2-111111211111131122-------------4311132655A68A856-56667796C858666666653511344645676666676666726646665--233333312333-1-1-----1-1-1-224332322-21112222-----11---1-11211223-2221-11321111211112222323322111211222222221111---211--11-----1-1--2----2-----1-----1--------1221-132222-- ----111-211111111111222212211----1111111111----11122222211111111111111111111111111111111-1-1111111111111-1-1412111111111111111111371-1121-112111-1111111111111211-1113131111131-111-32122B5781972132231 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 307 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEcccEEEEEEEccccccTTcccccccEEEEEEcHHHHHHHHHHHTTcEEEEEcEEcTTTTTcHHHHHHHHTTcccTTcEEccccccEEEEEEcccccEEccEEcGGGGGGGGcccccccEEEEEEEEccccHHHHHHHHHHHcTTcEEEEccGGGGGGccHHHHHHHHHTccEEEEEHHHHHHHHHcccccTTHHHTccHHHHHTTccEEEEEcGGGcEEEEccccEEEEcccccccccccTTHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHTTcccccTTcccHHHHHHHHHHE DISOP:02AL 1-1,306-308| PSIPRED cccEEEEEccccHHEEEEcccccccccEEEccEEEEEcccHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHcccccEEEEEcccccEEEEEEEcccccEEEEEcccccccccHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHccccEEEcHHHHHHHHHHHHHcccEEEEcHHHHHHHHccccccHHHHHHHHHHHHHccccEEEEEEccccEEEEEcccEEEEEcccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcc //