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Lactobacillus salivarius UCC118 (lsal0)
Gene : rplI
DDBJ      :rplI         LSU ribosomal protein L9P
Swiss-Prot:RL9_LACS1    RecName: Full=50S ribosomal protein L9;

Homologs  Archaea  0/68 : Bacteria  220/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.100.1d.99.1
:149 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->149 1divA PDBj 4e-29 58.1 %
:RPS:PDB   1->149 1divA PDBj 1e-28 45.6 %
:RPS:SCOP  1->30 1divA2  d.100.1.1 * 3e-06 66.7 %
:RPS:SCOP  78->149 1divA1  d.99.1.1 * 8e-22 62.5 %
:HMM:SCOP  1->54 2j01I2 d.100.1.1 * 2.8e-10 37.0 %
:HMM:SCOP  55->150 1divA1 d.99.1.1 * 8.9e-27 50.5 %
:RPS:PFM   1->30 PF01281 * Ribosomal_L9_N 2e-04 56.7 %
:RPS:PFM   78->146 PF03948 * Ribosomal_L9_C 4e-16 60.9 %
:HMM:PFM   61->148 PF03948 * Ribosomal_L9_C 2.7e-31 53.5 86/87  
:HMM:PFM   1->47 PF01281 * Ribosomal_L9_N 1.5e-16 42.6 47/48  
:BLT:SWISS 1->149 RL9_LACS1 2e-57 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00529.1 GT:GENE rplI GT:PRODUCT LSU ribosomal protein L9P GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1809124..1809573) GB:FROM 1809124 GB:TO 1809573 GB:DIRECTION - GB:GENE rplI GB:PRODUCT LSU ribosomal protein L9P GB:NOTE COG0359 [J] Ribosomal protein L9 GB:PROTEIN_ID ABE00529.1 GB:DB_XREF GI:90821890 GB:GENE:GENE rplI LENGTH 149 SQ:AASEQ MKIIFTEDVRGKGRRGEIKELPDGYANFLIKQNKAKQANAQAMSQLKGQKRAEARKEAEELEEAKKFKELLESGERVVEMKAKAGTDGRLFGSITSKQISQELEKQYGMKIDKRKMELREPIRTMGYVNVPVKLHNEVTAKIRVHISEK GT:EXON 1|1-149:0| SW:ID RL9_LACS1 SW:DE RecName: Full=50S ribosomal protein L9; SW:GN Name=rplI; OrderedLocusNames=LSL_1727; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;rRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->149|RL9_LACS1|2e-57|100.0|149/149| GO:SWS:NREP 4 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| SEG 31->42|kqnkakqanaqa| SEG 50->72|kraearkeaeeleeakkfkelle| BL:PDB:NREP 1 BL:PDB:REP 1->149|1divA|4e-29|58.1|148/149| RP:PDB:NREP 1 RP:PDB:REP 1->149|1divA|1e-28|45.6|147/149| RP:PFM:NREP 2 RP:PFM:REP 1->30|PF01281|2e-04|56.7|30/48|Ribosomal_L9_N| RP:PFM:REP 78->146|PF03948|4e-16|60.9|69/87|Ribosomal_L9_C| HM:PFM:NREP 2 HM:PFM:REP 61->148|PF03948|2.7e-31|53.5|86/87|Ribosomal_L9_C| HM:PFM:REP 1->47|PF01281|1.5e-16|42.6|47/48|Ribosomal_L9_N| RP:SCP:NREP 2 RP:SCP:REP 1->30|1divA2|3e-06|66.7|30/55|d.100.1.1| RP:SCP:REP 78->149|1divA1|8e-22|62.5|72/94|d.99.1.1| HM:SCP:REP 1->54|2j01I2|2.8e-10|37.0|54/0|d.100.1.1|1/1|L9 N-domain-like| HM:SCP:REP 55->150|1divA1|8.9e-27|50.5|91/94|d.99.1.1|1/1|Ribosomal protein L9 C-domain| OP:NHOMO 221 OP:NHOMOORG 220 OP:PATTERN -------------------------------------------------------------------- 111---------------------------------1---1----1------------11--1----11-1--------1--1-1-1------------------1------------------------11---------111-1------------------------------------------21-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1-11---111111-11111111-11111111111--111--------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------1------------1--11111111---1--1--------1-------11-1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11----1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 149 STR:RPRED 100.0 SQ:SECSTR cEEEEcccccccGGGTEEEEccTTHHHTTTTTTcEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHcTccEEEEEcccGGGEEEEEEcHHHHHHHHHHHHcccccGGGccccccEEEcEEEEEEEEEETTEEEEEEEEEEEc DISOP:02AL 38-39,44-44,49-64| PSIPRED cEEEEccccccccccccEEEccccHHHHHHHccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccEEEcccHHHHHHHHHHHHcccccccEEEccccccccEEEEEEEEEcccEEEEEEEEEEEc //