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Lactobacillus salivarius UCC118 (lsal0)
Gene : rplJ
DDBJ      :rplJ         LSU ribosomal protein L10P
Swiss-Prot:RL10_LACS1   RecName: Full=50S ribosomal protein L10;

Homologs  Archaea  0/68 : Bacteria  867/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
d.58.62
:167 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->158 1zaxA PDBj 5e-21 34.4 %
:RPS:PDB   27->162 2ebfX PDBj 4e-05 9.8 %
:RPS:SCOP  6->161 1zavA1  d.58.62.1 * 6e-33 33.3 %
:RPS:PFM   8->100 PF00466 * Ribosomal_L10 9e-16 50.5 %
:HMM:PFM   6->101 PF00466 * Ribosomal_L10 1.3e-32 47.9 96/100  
:BLT:SWISS 1->167 RL10_LACS1 5e-89 100.0 %
:PROS 9->43|PS01109|RIBOSOMAL_L10

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00045.1 GT:GENE rplJ GT:PRODUCT LSU ribosomal protein L10P GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1271311..1271814) GB:FROM 1271311 GB:TO 1271814 GB:DIRECTION - GB:GENE rplJ GB:PRODUCT LSU ribosomal protein L10P GB:NOTE COG0244 [J] Ribosomal protein L10 GB:PROTEIN_ID ABE00045.1 GB:DB_XREF GI:90821406 GB:GENE:GENE rplJ LENGTH 167 SQ:AASEQ MSKEIIAKKAAIVEEVFEKFQSASSVVVVDYRGLTVEEVTDLRKQLREAGVEMRVIKNTFLKRAADKAGYEGLDDTFSGPTAVAFGGEDITAPARIMAKFAEDHEALEIKGGMIEGKIASLEEINALAKLPNRDGLLSMLLSVLQAPVRNFAYAVKAVADSKDEDAA GT:EXON 1|1-167:0| SW:ID RL10_LACS1 SW:DE RecName: Full=50S ribosomal protein L10; SW:GN Name=rplJ; OrderedLocusNames=LSL_1238; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->167|RL10_LACS1|5e-89|100.0|167/167| GO:SWS:NREP 2 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| PROS 9->43|PS01109|RIBOSOMAL_L10|PDOC00853| BL:PDB:NREP 1 BL:PDB:REP 8->158|1zaxA|5e-21|34.4|151/174| RP:PDB:NREP 1 RP:PDB:REP 27->162|2ebfX|4e-05|9.8|132/711| RP:PFM:NREP 1 RP:PFM:REP 8->100|PF00466|9e-16|50.5|93/100|Ribosomal_L10| HM:PFM:NREP 1 HM:PFM:REP 6->101|PF00466|1.3e-32|47.9|96/100|Ribosomal_L10| GO:PFM:NREP 2 GO:PFM GO:0005622|"GO:intracellular"|PF00466|IPR001790| GO:PFM GO:0042254|"GO:ribosome biogenesis"|PF00466|IPR001790| RP:SCP:NREP 1 RP:SCP:REP 6->161|1zavA1|6e-33|33.3|156/177|d.58.62.1| OP:NHOMO 875 OP:NHOMOORG 872 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111---1----1--11111111111--------------111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111-11-211111111111111111111----------111111111111111----11111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111-1111111-11111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1-2----1--1----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 162 STR:RPRED 97.0 SQ:SECSTR ##HHHHHHHHHHHHHHHHHHTTccEEHHTccTTccEEEEEcHHHHccEEccccEEccHHHHHTccEEEEcccccEEEccccGGGcccccccccTTcccccccccEEccccccccccccccHHHcEEcHHHHHHTTccHHHHHHHHHHHHHHHTcHHHHHTccHT### DISOP:02AL 1-2,158-168| PSIPRED ccHHHHHHHHHHHHHHHHHHHHccEEEEEEEccccHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHccccHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHccccEEEEEEEccEEccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //