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Lactobacillus salivarius UCC118 (lsal0)
Gene : rplP
DDBJ      :rplP         LSU ribosomal protein L16P
Swiss-Prot:RL16_LACS1   RecName: Full=50S ribosomal protein L16;

Homologs  Archaea  0/68 : Bacteria  910/915 : Eukaryota  103/199 : Viruses  0/175   --->[See Alignment]
d.41.4
:144 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->135 1vs9K PDBj 3e-45 59.3 %
:RPS:PDB   1->134 3bboO PDBj 7e-46 51.5 %
:RPS:SCOP  1->135 1vs6M1  d.41.4.2 * 3e-46 56.7 %
:HMM:SCOP  3->134 2gyaK1 d.41.4.2 * 1.1e-54 58.8 %
:RPS:PFM   4->132 PF00252 * Ribosomal_L16 3e-31 57.8 %
:HMM:PFM   4->133 PF00252 * Ribosomal_L16 1e-53 53.1 130/133  
:BLT:SWISS 1->144 RL16_LACS1 1e-81 100.0 %
:PROS 59->70|PS00586|RIBOSOMAL_L16_1
:PROS 82->93|PS00701|RIBOSOMAL_L16_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00232.1 GT:GENE rplP GT:PRODUCT LSU ribosomal protein L16P GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1491964..1492398) GB:FROM 1491964 GB:TO 1492398 GB:DIRECTION - GB:GENE rplP GB:PRODUCT LSU ribosomal protein L16P GB:NOTE COG0197 [J] Ribosomal protein L16/L10E GB:PROTEIN_ID ABE00232.1 GB:DB_XREF GI:90821593 GB:GENE:GENE rplP LENGTH 144 SQ:AASEQ MLVPKRVKHRREFRGKMRGEAKGGKEVTFGKYGLKALDSHWITNRQIEAARIAMTRYMKRGGKVWIKIFPHKSYTAKAIGVRMGSGKGAPEGWVAPVKRGKVLFEIDGVSEEVAREALRLASHKLPVKTKFVQREEVGGESNEG GT:EXON 1|1-144:0| SW:ID RL16_LACS1 SW:DE RecName: Full=50S ribosomal protein L16; SW:GN Name=rplP; OrderedLocusNames=LSL_1428; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;rRNA-binding; tRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->144|RL16_LACS1|1e-81|100.0|144/144| GO:SWS:NREP 5 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| GO:SWS GO:0000049|"GO:tRNA binding"|tRNA-binding| PROS 59->70|PS00586|RIBOSOMAL_L16_1|PDOC00506| PROS 82->93|PS00701|RIBOSOMAL_L16_2|PDOC00506| BL:PDB:NREP 1 BL:PDB:REP 1->135|1vs9K|3e-45|59.3|135/137| RP:PDB:NREP 1 RP:PDB:REP 1->134|3bboO|7e-46|51.5|134/135| RP:PFM:NREP 1 RP:PFM:REP 4->132|PF00252|3e-31|57.8|128/130|Ribosomal_L16| HM:PFM:NREP 1 HM:PFM:REP 4->133|PF00252|1e-53|53.1|130/133|Ribosomal_L16| GO:PFM:NREP 3 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00252|IPR016180| GO:PFM GO:0005840|"GO:ribosome"|PF00252|IPR016180| GO:PFM GO:0006412|"GO:translation"|PF00252|IPR016180| RP:SCP:NREP 1 RP:SCP:REP 1->135|1vs6M1|3e-46|56.7|134/136|d.41.4.2| HM:SCP:REP 3->134|2gyaK1|1.1e-54|58.8|131/0|d.41.4.2|1/1|Ribosomal protein L16p/L10e| OP:NHOMO 1031 OP:NHOMOORG 1013 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111-11111111111111111111111111111111 -1----------1111-111111-1-1111111111-111-11---11111-11-1-11111-11111--1111-1111111111111-121-111111-1-1112---------3-11-------1--141-11-111---1----------1-1-----------------11211----1--12-4113------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 138 STR:RPRED 95.8 SQ:SECSTR cccccccccccccccccccTTccccccccccEEEEEcccccccHHHHHHHHHHHHHTTccccccccccccccccccccccccccccccccccccccccTTcEEEEEccccTTHHHHHHHHHHHHccccEEEEccTTcc###### DISOP:02AL 1-2,140-145| PSIPRED cccccccccccccccccccccccccEEEEccEEEEEcccccccHHHHHHHHHHHHHHcccccEEEEEEcccccEEccccccccccccccccEEEEEEccccEEEEEccccHHHHHHHHHHHHHHccccEEEEEEHHHHHHHHcc //