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Lactobacillus salivarius UCC118 (lsal0)
Gene : rpsB
DDBJ      :rpsB         SSU ribosomal protein S2P
Swiss-Prot:RS2_LACS1    RecName: Full=30S ribosomal protein S2;

Homologs  Archaea  17/68 : Bacteria  908/915 : Eukaryota  100/199 : Viruses  0/175   --->[See Alignment]
c.23.15
:265 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->238 2gy9B PDBj 1e-64 49.1 %
:RPS:PDB   4->227 3bbnB PDBj 4e-73 41.1 %
:RPS:SCOP  6->239 1fjgB  c.23.15.1 * 3e-88 46.6 %
:HMM:SCOP  6->242 1fjgB_ c.23.15.1 * 1.8e-99 57.8 %
:RPS:PFM   9->223 PF00318 * Ribosomal_S2 3e-71 58.8 %
:HMM:PFM   9->225 PF00318 * Ribosomal_S2 5.7e-90 57.3 211/211  
:BLT:SWISS 1->265 RS2_LACS1 e-128 100.0 %
:PROS 6->17|PS00962|RIBOSOMAL_S2_1
:PROS 158->182|PS00963|RIBOSOMAL_S2_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99320.1 GT:GENE rpsB GT:PRODUCT SSU ribosomal protein S2P GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 557234..558031 GB:FROM 557234 GB:TO 558031 GB:DIRECTION + GB:GENE rpsB GB:PRODUCT SSU ribosomal protein S2P GB:NOTE COG0052 [J] Ribosomal protein S2 GB:PROTEIN_ID ABD99320.1 GB:DB_XREF GI:90820681 GB:GENE:GENE rpsB LENGTH 265 SQ:AASEQ MAVITMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLIDDAYDFIKDAASDDGVVLFVGTKKQAQEAIEEEAKRAGQYYVNHRWLGGTLTNWNTIQKRIKKLKEIKAMAEDGTFDRLPKKEVALLIKQRDRLEKFLGGIEDMPRIPDVLFIVDPRKERIAVKEAQKLNIPIVAMVDTNADPDEIDVKIPSNDDAIRAVRLITSKMADAIIEGRQGEDDAPVTEDTFENTDDQVDSIEDIVEVVEGDNDSTDAE GT:EXON 1|1-265:0| SW:ID RS2_LACS1 SW:DE RecName: Full=30S ribosomal protein S2; SW:GN Name=rpsB; OrderedLocusNames=LSL_0511; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->265|RS2_LACS1|e-128|100.0|265/265| GO:SWS:NREP 2 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| PROS 6->17|PS00962|RIBOSOMAL_S2_1|PDOC00744| PROS 158->182|PS00963|RIBOSOMAL_S2_2|PDOC00744| SEG 73->87|kkqaqeaieeeakra| SEG 242->260|ddqvdsiedivevvegdnd| BL:PDB:NREP 1 BL:PDB:REP 6->238|2gy9B|1e-64|49.1|232/236| RP:PDB:NREP 1 RP:PDB:REP 4->227|3bbnB|4e-73|41.1|224/231| RP:PFM:NREP 1 RP:PFM:REP 9->223|PF00318|3e-71|58.8|211/212|Ribosomal_S2| HM:PFM:NREP 1 HM:PFM:REP 9->225|PF00318|5.7e-90|57.3|211/211|Ribosomal_S2| GO:PFM:NREP 4 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00318|IPR001865| GO:PFM GO:0005622|"GO:intracellular"|PF00318|IPR001865| GO:PFM GO:0005840|"GO:ribosome"|PF00318|IPR001865| GO:PFM GO:0006412|"GO:translation"|PF00318|IPR001865| RP:SCP:NREP 1 RP:SCP:REP 6->239|1fjgB|3e-88|46.6|234/237|c.23.15.1| HM:SCP:REP 6->242|1fjgB_|1.8e-99|57.8|237/0|c.23.15.1|1/1|Ribosomal protein S2| OP:NHOMO 1032 OP:NHOMOORG 1025 OP:PATTERN 11----11----------11111--11----1----------------1------1-111-------- 1111111111111111111-11111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111 ------1-----1111111111111111-111111111111111111111111111111-111111111111111111111--11111-1--1-1-----11-111-12-2--------------------------------------------------21111-11----112---------111-1-1------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 239 STR:RPRED 90.2 SQ:SECSTR ccHcccHHHHHTccccccccccccGGGGGGEEEEETTEEEEcHHHHHHHTHHHHHHcHHHHTTTccEEEEcccTTTHHHHHHHHHHHTcEEccccccccccccHHHHHHHHHHHHHHHHcTTcTTTTTccHHHHHHHHHHHHHHTTcTTcTTcccccccEEEEccTTTTHHHHHHHHTTTccEEEccccccccccccEEcccccccHHHHHHHHHHHHHHHHHTccccccccccGGGGc########################## DISOP:02AL 1-1,75-85,228-231,257-266| PSIPRED cccccHHHHHHcccccccccccccccccHHEEEEEccEEEEcHHHHHHHHHHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHccccEEccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHccccEEEEEccccccccccEEccccccHHHHHHHHHHHHHHHHHHHHccHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccc //