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Lactobacillus salivarius UCC118 (lsal0)
Gene : rpsJ
DDBJ      :rpsJ         SSU ribosomal protein S10P
Swiss-Prot:RS10_LACS1   RecName: Full=30S ribosomal protein S10;

Homologs  Archaea  58/68 : Bacteria  901/915 : Eukaryota  49/199 : Viruses  0/175   --->[See Alignment]
d.58.15
:102 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->102 1vs5J PDBj 5e-35 63.3 %
:RPS:PDB   4->102 3bbnJ PDBj 3e-33 52.5 %
:RPS:SCOP  5->101 1fjgJ  d.58.15.1 * 1e-31 63.9 %
:HMM:SCOP  5->102 1fjgJ_ d.58.15.1 * 7.3e-38 62.2 %
:RPS:PFM   6->102 PF00338 * Ribosomal_S10 2e-33 77.3 %
:HMM:PFM   6->102 PF00338 * Ribosomal_S10 2.1e-44 59.8 97/97  
:BLT:SWISS 1->102 RS10_LACS1 8e-55 100.0 %
:PROS 29->44|PS00361|RIBOSOMAL_S10

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00240.1 GT:GENE rpsJ GT:PRODUCT SSU ribosomal protein S10P GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1496224..1496532) GB:FROM 1496224 GB:TO 1496532 GB:DIRECTION - GB:GENE rpsJ GB:PRODUCT SSU ribosomal protein S10P GB:NOTE COG0051 [J] Ribosomal protein S10 GB:PROTEIN_ID ABE00240.1 GB:DB_XREF GI:90821601 GB:GENE:GENE rpsJ LENGTH 102 SQ:AASEQ MAKQKIRIRLKAYEHRILDQSADKIVETAKRTGATISGPIPLPTERTLYTVIRSPHKYKDSREQFEMRTHKRLIDIVNPTPKTVDSLMKLDLPSGVDIEIKL GT:EXON 1|1-102:0| SW:ID RS10_LACS1 SW:DE RecName: Full=30S ribosomal protein S10; SW:GN Name=rpsJ; OrderedLocusNames=LSL_1436; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->102|RS10_LACS1|8e-55|100.0|102/102| GO:SWS:NREP 2 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| PROS 29->44|PS00361|RIBOSOMAL_S10|PDOC00312| BL:PDB:NREP 1 BL:PDB:REP 5->102|1vs5J|5e-35|63.3|98/98| RP:PDB:NREP 1 RP:PDB:REP 4->102|3bbnJ|3e-33|52.5|99/99| RP:PFM:NREP 1 RP:PFM:REP 6->102|PF00338|2e-33|77.3|97/97|Ribosomal_S10| HM:PFM:NREP 1 HM:PFM:REP 6->102|PF00338|2.1e-44|59.8|97/97|Ribosomal_S10| GO:PFM:NREP 4 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00338|IPR001848| GO:PFM GO:0005622|"GO:intracellular"|PF00338|IPR001848| GO:PFM GO:0005840|"GO:ribosome"|PF00338|IPR001848| GO:PFM GO:0006412|"GO:translation"|PF00338|IPR001848| RP:SCP:NREP 1 RP:SCP:REP 5->101|1fjgJ|1e-31|63.9|97/98|d.58.15.1| HM:SCP:REP 5->102|1fjgJ_|7.3e-38|62.2|98/0|d.58.15.1|1/1|Ribosomal protein S10| OP:NHOMO 1029 OP:NHOMOORG 1008 OP:PATTERN 1111-11111111111111-1-111111-11111111111111111111----111111111111-1- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111121111111111111111111111111111-111111111111-2-111111111111111111111111111111111111111111111111111111111111111111-1111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111-111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111-11111111111111111111111111111111 ----111--------1--------------------------------111111--------1--1111-11-1-111111--------1---1-------1-112------2---------------------------------------------------------3---211117111113123-11------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 102 STR:RPRED 100.0 SQ:SECSTR cTTcccEEEEEEccHHHHHHHTTHHHHTTTTTcccEEEEEEcccEEEEEcccccccccccccccEEEEEEEEEEEEccccHHHHHHHTTcccccccEEEEEc DISOP:02AL 1-2| PSIPRED cccEEEEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEEccccEEEEEEEEcccccccHHHHHEEEEEEEEEEEEcccHHHHHHHHccccccccEEEEEc //