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Lactobacillus salivarius UCC118 (lsal0)
Gene : tatD
DDBJ      :tatD         DNase, TatD family
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  907/915 : Eukaryota  174/199 : Viruses  0/175   --->[See Alignment]
c.1.9
:256 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->251 2gzxA PDBj 3e-50 43.4 %
:RPS:PDB   1->221 3bq6B PDBj 3e-36 12.1 %
:RPS:SCOP  5->253 1j6oA  c.1.9.12 * 3e-70 35.7 %
:HMM:SCOP  3->256 1xwyA1 c.1.9.12 * 6.8e-84 44.5 %
:RPS:PFM   5->251 PF01026 * TatD_DNase 2e-57 45.7 %
:HMM:PFM   4->252 PF01026 * TatD_DNase 2e-77 42.6 249/255  
:BLT:SWISS 3->255 YABD_BACSU 1e-63 45.8 %
:PROS 124->134|PS01090|TATD_2
:PROS 3->11|PS01137|TATD_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99042.1 GT:GENE tatD GT:PRODUCT DNase, TatD family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 282147..282917 GB:FROM 282147 GB:TO 282917 GB:DIRECTION + GB:GENE tatD GB:PRODUCT DNase, TatD family GB:NOTE COG0084 [L] Mg-dependent DNase GB:PROTEIN_ID ABD99042.1 GB:DB_XREF GI:90820403 GB:GENE:GENE tatD LENGTH 256 SQ:AASEQ MEIFDSHTHINSHEFDNDIPDVIERAKALDVTEMLVIGYDDDSRKKLQEIIQEYPHIYGAVGCHPEDALNYNAEYEQELRKYLELEKFVAVGEIGLDYYHDSPKKVQHEVFEKQIALAQELNLPISVHNRDAFEDCYAILKNMNIQKNGGIMHSFNGDAIWAEKFLDLGMELSYSGVVTFKSAKDVQESMMMTPLEHMLVETDAPYLTPMPYRNRMNEPAMTRYTLEFIAEKRGISSEELAEITRKNTERVLKINE GT:EXON 1|1-256:0| BL:SWS:NREP 1 BL:SWS:REP 3->255|YABD_BACSU|1e-63|45.8|253/255| PROS 124->134|PS01090|TATD_2|PDOC00836| PROS 3->11|PS01137|TATD_1|PDOC00836| BL:PDB:NREP 1 BL:PDB:REP 3->251|2gzxA|3e-50|43.4|244/248| RP:PDB:NREP 1 RP:PDB:REP 1->221|3bq6B|3e-36|12.1|214/718| RP:PFM:NREP 1 RP:PFM:REP 5->251|PF01026|2e-57|45.7|247/255|TatD_DNase| HM:PFM:NREP 1 HM:PFM:REP 4->252|PF01026|2e-77|42.6|249/255|TatD_DNase| GO:PFM:NREP 1 GO:PFM GO:0016888|"GO:endodeoxyribonuclease activity, producing 5'-phosphomonoesters"|PF01026|IPR001130| RP:SCP:NREP 1 RP:SCP:REP 5->253|1j6oA|3e-70|35.7|249/260|c.1.9.12| HM:SCP:REP 3->256|1xwyA1|6.8e-84|44.5|254/0|c.1.9.12|1/1|Metallo-dependent hydrolases| OP:NHOMO 1841 OP:NHOMOORG 1127 OP:PATTERN --111-222222222221111-----------22111111111-----1111111111111---1111 1111111111111111111-121111111111111111111111111111111111111111111111111111111111-1111111222111121--1131111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222222122222211111122212111111111112311111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111121111111111111111111111111112111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222222222222222222222222222222222222222222222222222222222222222111222212121211111111222222232222221111111111111111111111111111223323223333333333333333333333331-2111211111133333333333333333-33333333333333333333333322233333333333333333332333311323233333333111311111111112333333222222212222222222222232333333333333333333212132122333333333333332212222222222211311111111111111132111112-11211111111111211111111111111121 -1-1442-21211-2-1122121232211111111111-1-1111111122222111--111111----1--111-------111111-24211251111211121113372541421222333A23437M4135432-26244434344332512235222273113223146212-1E2211222321421243331 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 256 STR:RPRED 100.0 SQ:SECSTR EEcTTcccEEEEcccccccccccccHHHHHHHHHHTTTccEEcHHHHHHTcEETTEEcccHHHHHHHHHHHHHHHHHHHHHHHHTcccEEEEcGGGGccccHHHHHHHHHHHHHHHTTTTTTccEEEEccccccccHHHHHTccccEEEEEcccccHHHHHHHHHcccTTcEEEEEEEcccccccHHHHHHHHHHTccEEEEcccGGcGcccccTcTcccccHHHHHHHHHGHcccHHHHHHHHTHHHHHHHTccc PSIPRED cEEEEEEcccccHHHHccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHcccEEEEEEEcHHHHccccHHHHHHHHHHHHcccEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHcccEEEEccEEccccHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccc //