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Lactobacillus salivarius UCC118 (lsal0)
Gene : thrS
DDBJ      :thrS         Threonyl-tRNA synthetase
Swiss-Prot:SYT_LACS1    RecName: Full=Threonyl-tRNA synthetase;         EC=6.1.1.3;AltName: Full=Threonine--tRNA ligase;         Short=ThrRS;

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
c.116.1c.51.1d.104.1d.15.10d.67.1
:649 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->642 1nyqB PDBj 0.0 58.2 %
:RPS:PDB   3->63 3biiD PDBj 7e-05 11.9 %
:RPS:PDB   76->565 2cimB PDBj 3e-65 11.6 %
:RPS:SCOP  4->62 1nyqA2  d.15.10.1 * 5e-20 61.0 %
:RPS:SCOP  63->244 1nyqA3  d.67.1.1 * 1e-38 47.5 %
:RPS:SCOP  244->540 1evkA2  d.104.1.1 * e-100 37.6 %
:RPS:SCOP  519->645 1o6dA  c.116.1.3 * 1e-26 14.2 %
:HMM:SCOP  4->63 1qf6A2 d.15.10.1 * 7e-18 58.3 %
:HMM:SCOP  65->243 1qf6A3 d.67.1.1 * 3.7e-48 44.6 %
:HMM:SCOP  245->535 1nyrA4 d.104.1.1 * 3.1e-91 39.9 %
:HMM:SCOP  538->644 1nj1A1 c.51.1.1 * 5.6e-31 44.9 %
:RPS:PFM   4->63 PF02824 * TGS 2e-12 51.7 %
:RPS:PFM   276->428 PF00587 * tRNA-synt_2b 2e-20 33.8 %
:RPS:PFM   551->626 PF03129 * HGTP_anticodon 1e-15 45.3 %
:HMM:PFM   277->446 PF00587 * tRNA-synt_2b 4.6e-41 31.5 168/173  
:HMM:PFM   550->638 PF03129 * HGTP_anticodon 5.8e-26 38.2 89/94  
:HMM:PFM   4->63 PF02824 * TGS 1.6e-14 35.0 60/60  
:HMM:PFM   175->221 PF07973 * tRNA_SAD 1.7e-08 35.0 40/44  
:BLT:SWISS 1->649 SYT_LACS1 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99303.1 GT:GENE thrS GT:PRODUCT Threonyl-tRNA synthetase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 543759..545708 GB:FROM 543759 GB:TO 545708 GB:DIRECTION + GB:GENE thrS GB:PRODUCT Threonyl-tRNA synthetase GB:NOTE COG0441 [J] Threonyl-tRNA synthetase GB:PROTEIN_ID ABD99303.1 GB:DB_XREF GI:90820664 GB:GENE:GENE thrS LENGTH 649 SQ:AASEQ MSSIKITFPDNSVKEFDAGVTTAEIAKSISISLAKKAVAGKVDGNFVDLNQPLKEDGSIEIITKDSNDGLVVLWRTAAQVLANALHELYPNMKFGMGDVTEHGFYFDTDNSESQVAETDFEKISQKMSEIIKANLPIERVEFSEEEALNLVSGDEYQEELVRDVANKNNGRVVAYKQGDFIDITDGVVLSSTGEVKIFKLLSVAGAYWKGASSNPMLQRIYGTAFYKQKDLDAELQRQKEARERDHRVIGNELDLFFVDPKVGAGLPYWMPNGATIRRVIERYIIDKEVAWGFQHVYTPVLANLNLYKQSGHWDHYREDMFPPMDMGDGEMLELRPMNCPSHIQVYNHHKRSYRELPLRIAELGMMHRYEKSGALTGLSRVREMTLNDGHDFIEPDHIEDEIKTLIKLMTEVYNDFDITDYRFRLSYRDPKNTEKYFDDDEMWEKSQSKLKAAMDDMGLEYFEAEGEAAFYGPKIDVQTKTALGGEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMVHRGIVSTMERFTAYLTEMYKGAFPTWLAPHQVDIIPVKNDLHMDYVNDLSSKLRAHGIRVTVDDRNEKMGYKIRQAQVNKIPYTLVIGDEEVSNGTVTVRKYGEEKTNTMTKAEFKNLLFEDIENYSREK GT:EXON 1|1-649:0| SW:ID SYT_LACS1 SW:DE RecName: Full=Threonyl-tRNA synthetase; EC=6.1.1.3;AltName: Full=Threonine--tRNA ligase; Short=ThrRS; SW:GN Name=thrS; OrderedLocusNames=LSL_0494; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Metal-binding; Nucleotide-binding; Protein biosynthesis; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->649|SYT_LACS1|0.0|100.0|649/649| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 460->472|eyfeaegeaafyg| BL:PDB:NREP 1 BL:PDB:REP 1->642|1nyqB|0.0|58.2|639/645| RP:PDB:NREP 2 RP:PDB:REP 3->63|3biiD|7e-05|11.9|59/80| RP:PDB:REP 76->565|2cimB|3e-65|11.6|440/477| RP:PFM:NREP 3 RP:PFM:REP 4->63|PF02824|2e-12|51.7|60/60|TGS| RP:PFM:REP 276->428|PF00587|2e-20|33.8|151/170|tRNA-synt_2b| RP:PFM:REP 551->626|PF03129|1e-15|45.3|75/91|HGTP_anticodon| HM:PFM:NREP 4 HM:PFM:REP 277->446|PF00587|4.6e-41|31.5|168/173|tRNA-synt_2b| HM:PFM:REP 550->638|PF03129|5.8e-26|38.2|89/94|HGTP_anticodon| HM:PFM:REP 4->63|PF02824|1.6e-14|35.0|60/60|TGS| HM:PFM:REP 175->221|PF07973|1.7e-08|35.0|40/44|tRNA_SAD| GO:PFM:NREP 9 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03129|IPR004154| GO:PFM GO:0005524|"GO:ATP binding"|PF03129|IPR004154| GO:PFM GO:0006412|"GO:translation"|PF03129|IPR004154| RP:SCP:NREP 4 RP:SCP:REP 4->62|1nyqA2|5e-20|61.0|59/59|d.15.10.1| RP:SCP:REP 63->244|1nyqA3|1e-38|47.5|179/179|d.67.1.1| RP:SCP:REP 244->540|1evkA2|e-100|37.6|290/291|d.104.1.1| RP:SCP:REP 519->645|1o6dA|1e-26|14.2|127/147|c.116.1.3| HM:SCP:REP 4->63|1qf6A2|7e-18|58.3|60/0|d.15.10.1|1/1|TGS-like| HM:SCP:REP 65->243|1qf6A3|3.7e-48|44.6|177/179|d.67.1.1|1/1|ThrRS/AlaRS common domain| HM:SCP:REP 245->535|1nyrA4|3.1e-91|39.9|291/291|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 538->644|1nj1A1|5.6e-31|44.9|107/127|c.51.1.1|1/1|Class II aaRS ABD-related| OP:NHOMO 1659 OP:NHOMOORG 1171 OP:PATTERN 11111121222222211211111111111111111111111111111112111111111111111111 1111211111111111111-11111111111112222211122212111111111112222211112121111111111112111122221211111--1111111111111111111111111211111111111111111111133111121111111111111122111111111111111111111111122222222222222221332222211121111111111211111111111111121121111111111111111111111111111111111111111111111111111111111111111111111121124111111111222112111212111112111111121121212111111111111111111211111111111111111111-11111111112111111111111111211112222221211111111111121121111111111111111111111111111111111111111111112111111121111111221111111112111111111111121111111111111111111211111111111111111111111111121211111111111111111111111111111111111211112222111111111111111-1111111111121111111111111111-11111111111111111111121111211111111111111111111111111111111111111111111111111111212111111111111111111111111111111112111111111111111111111111211111211111111111111111112112211111111111131211111-11111111111111111112111123222121 1111222-311122211222222222222222222122222222222222222212222222222222222122222-2322222222-1311111111111222212B324734643323333573639T3-66B3333933442344333494534213A11221423512322222F2222242442432252223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 649 STR:RPRED 100.0 SQ:SECSTR cccccccccccTTcccccEETTEEEHHHHHHcEEEEccTTcccEEEEccGGccEEEEEEEEEEccccGGGHHHHHcccccEEEEEEEEccccccTTHHHHHHHHHHHHHTGGGTTccTTcccEEEEEccEEEEEEEEcccccHHHHHHHHHHHHHHHHTTTccEEEEEEEEEEEEEccccccccccTTEEEEEEETTEEEEEEEEcccHHHHHTTHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccHHHHHHHHTcccTTcEEEcHHHHHHHHHHHHHHHHHTHHHTcEEcccccEEEHHHHHHHcGGGTcGGGccEEccccccccEEEcccccGGGGGTTTTcEEcGGGccEEEEEcccEEEcccccccccTTcccEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTccccEEEEEEccccEEEEEEEccGGGccGGGcTTcEEEEEccEEEEEEEEcTTHHHHHTTcEETTcccEEEEEEEEEETHHHHHHHTcEETccTccGTcccEEEEEEEEEHHHHHHHHHHHHcccGGGccHHHHHHHcccccccHHcccHHHHHHHHTTTcccEEEcccccHHHHHHHHHHTTccEEEEEcHHHHTccEEEEEETTTccEEEEEHHHHHHHHHHHccHHHHHH DISOP:02AL 1-1,205-215,646-650| PSIPRED cccEEEEEccccEEEEcccccHHHHHHHccccHHccEEEEEEccEEEEcccccccccEEEEEEcccHHHHHHHcccHHHHHHHHHHHHccccEEEEcccccccEEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHccccHHHHHHHHcccccccEEEEEEcccEEEEEcccccccccccccEEEEEcccccccccccccEEEEEEccccccHHHHHHHHHHHHccccHHHHHHHHHcccccccHHHccccEEEcccHHHHHHHHHHHHHHHHHHcccEEEEcccEEcHHHHHHcccccccccccEEEEEcccccEEEEcccccHHHHHHHHHccccHHHccEEEEEEccEEEEcccccccccEEEHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHcccHHHHHHHHHHHHHHHHHccccEEcccccccccccccccccccccccEEEEEEEEEEccccccccEEEEcccccEEEEEEEEcccHHHHHHHHHHHHHHHcccccccccccEEEEEEcccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHccccEEEEEcHHHHHccEEEEEEcccccEEEEEHHHHHHHHHHHHHHHHccc //