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Lactobacillus salivarius UCC118 (lsal0)
Gene : treB
DDBJ      :treB         PTS system, trehalose-specific IIBC component
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  396/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
b.84.3d.95.1
:640 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->131 2gprA PDBj 2e-25 39.5 %
:RPS:PDB   7->107 3bg5A PDBj 8e-17 12.9 %
:RPS:PDB   168->242 3bp8C PDBj 9e-16 29.7 %
:RPS:SCOP  5->130 1f3gA  b.84.3.1 * 3e-29 33.3 %
:RPS:SCOP  168->242 3bp8C1  d.95.1.1 * 1e-16 29.7 %
:HMM:SCOP  3->152 2gprA_ b.84.3.1 * 8e-48 43.6 %
:HMM:SCOP  167->243 1o2fB_ d.95.1.1 * 4.8e-20 42.1 %
:RPS:PFM   6->132 PF00358 * PTS_EIIA_1 1e-30 49.6 %
:RPS:PFM   172->201 PF00367 * PTS_EIIB 1e-06 56.7 %
:RPS:PFM   317->543 PF02378 * PTS_EIIC 6e-07 31.9 %
:HMM:PFM   3->130 PF00358 * PTS_EIIA_1 3.2e-45 43.0 128/133  
:HMM:PFM   277->554 PF02378 * PTS_EIIC 8.1e-39 24.3 272/321  
:HMM:PFM   172->201 PF00367 * PTS_EIIB 2.6e-15 53.3 30/35  
:BLT:SWISS 3->127,163->552 PTV3B_BACHD 3e-70 39.2 %
:PROS 69->81|PS00371|PTS_EIIA_TYPE_1_HIS
:PROS 181->198|PS01035|PTS_EIIB_TYPE_1_CYS
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00316.1 GT:GENE treB GT:PRODUCT PTS system, trehalose-specific IIBC component GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1567963..1569885) GB:FROM 1567963 GB:TO 1569885 GB:DIRECTION - GB:GENE treB GB:PRODUCT PTS system, trehalose-specific IIBC component GB:NOTE COG1263 [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific GB:PROTEIN_ID ABE00316.1 GB:DB_XREF GI:90821677 GB:GENE:GENE treB LENGTH 640 SQ:AASEQ MAKKVKIVSPAAGKVLALSATNDEVFSTGMMGEGFGLEPVSEKVVAPVSGKITMVADSKHAVGITTKEGLEVLVHMGIDTVGLNGEPFDLAIQDGQEVKAGQALATMSLENIKLAGLETTIMVIITNSSDKLEGLDIEEGEVEAGKEVATAYVKAATKKNGKLDYDALADVIIDNVGGQENVNSLVHCITRLRFNLKDEGKAHDDVLKDTDGVIDVLHASGQYQVVIGNEVTNVFDAVMKKMPNLADAPAEDTAPVDDGRNPVSRAFGNLIGVITGSMSPVVGVIAASGIIKGLLALLTLPQLGALLDAKSTAYITVSAMADSAFYFLPVLVGFAAAKRLGGDPIVAAVIGGVLTYPQLVTWGKAFKGMFTIFGINFQFLNYTYSIFPMILAAWMAKKLGDWLKKVLPSYLQMIFNPLITVLVVSTITLVVTGPIIQGVANGIADFINWLVHSSGWVGGLVIGGFYQLLVIFGLHWGVVPLVAQQIAGSGESALNAIISVTMVSQGAAVLAVAIKSKKNDMKSLGIAAAISAFCGVTEPAIYGINLRYRKVFISGLIGSAVGGFVTGLMHGSMFGFTGSLIGFSSFFDLKHPSDLNSFYAFLISSALALVVSFVVTWVWGYSDDMAMGKKVEKKKRPGTV GT:EXON 1|1-640:0| BL:SWS:NREP 1 BL:SWS:REP 3->127,163->552|PTV3B_BACHD|3e-70|39.2|505/636| PROS 69->81|PS00371|PTS_EIIA_TYPE_1_HIS|PDOC00528| PROS 181->198|PS01035|PTS_EIIB_TYPE_1_CYS|PDOC00795| TM:NTM 8 TM:REGION 274->296| TM:REGION 312->334| TM:REGION 340->362| TM:REGION 418->440| TM:REGION 462->484| TM:REGION 494->515| TM:REGION 524->546| TM:REGION 597->619| SEG 138->159|eegeveagkevatayvkaatkk| SEG 294->309|llalltlpqlgallda| SEG 418->432|litvlvvstitlvvt| SEG 600->615|aflissalalvvsfvv| BL:PDB:NREP 1 BL:PDB:REP 3->131|2gprA|2e-25|39.5|129/154| RP:PDB:NREP 2 RP:PDB:REP 7->107|3bg5A|8e-17|12.9|101/1137| RP:PDB:REP 168->242|3bp8C|9e-16|29.7|74/75| RP:PFM:NREP 3 RP:PFM:REP 6->132|PF00358|1e-30|49.6|127/132|PTS_EIIA_1| RP:PFM:REP 172->201|PF00367|1e-06|56.7|30/35|PTS_EIIB| RP:PFM:REP 317->543|PF02378|6e-07|31.9|226/313|PTS_EIIC| HM:PFM:NREP 3 HM:PFM:REP 3->130|PF00358|3.2e-45|43.0|128/133|PTS_EIIA_1| HM:PFM:REP 277->554|PF02378|8.1e-39|24.3|272/321|PTS_EIIC| HM:PFM:REP 172->201|PF00367|2.6e-15|53.3|30/35|PTS_EIIB| GO:PFM:NREP 8 GO:PFM GO:0005351|"GO:sugar:hydrogen symporter activity"|PF00358|IPR001127| GO:PFM GO:0006810|"GO:transport"|PF00358|IPR001127| GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF00358|IPR001127| GO:PFM GO:0016020|"GO:membrane"|PF00358|IPR001127| GO:PFM GO:0005351|"GO:sugar:hydrogen symporter activity"|PF02378|IPR003352| GO:PFM GO:0008982|"GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"|PF02378|IPR003352| GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF02378|IPR003352| GO:PFM GO:0016020|"GO:membrane"|PF02378|IPR003352| RP:SCP:NREP 2 RP:SCP:REP 5->130|1f3gA|3e-29|33.3|126/150|b.84.3.1| RP:SCP:REP 168->242|3bp8C1|1e-16|29.7|74/75|d.95.1.1| HM:SCP:REP 3->152|2gprA_|8e-48|43.6|149/0|b.84.3.1|1/1|Duplicated hybrid motif| HM:SCP:REP 167->243|1o2fB_|4.8e-20|42.1|76/0|d.95.1.1|1/1|Glucose permease domain IIB| OP:NHOMO 1491 OP:NHOMOORG 398 OP:PATTERN -------------------------------------------------------------------- ----131122415------------1-----------111-------11----12--------4-1111111---2114---1-----------------------------------------------------------------------------------------------------1-----2-465555554545545457899996544441368366738125666666676666665334699-4761265AII227942846453455555444444444444443444444444444444557735554---6GAAAAA9B596-D11233311-2-212-----1---1--311--15---122---------------------------------2-----------------------------------------------------------------------------------1--------111111111111111111111211--1-----2------------------3----------------------------------------------------------------------1--434-----1-31111111111111111111-------11-11168742946555667666-5666665666565666666787996554444444444443444754455552-833333333333--1---------------222434111112113------------11111313-------------------22323333322222-----------------5------11111111-------A---212--111334-11---------------- -------------1-----------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 208 STR:RPRED 32.5 SQ:SECSTR ETccccEEEEEETTEEEEEEEEcccccccccccccccTTcTTEEEccccEEEEcccTTcEEcTTcEEEEEEccccEEEEEccccEEccEEcccTTcEEcTTcEEEEccHHHHGGGcccccEEEEEccGGGc#################################ccccHHHHHHHTTcTTTEEEEccccccEEEEEccGGGccHHHHHHH#TcccEEEETTEEEEcccTTHHHHHHHHHHHT############################################################################################################################################################################################################################################################################################################################################################################################################## DISOP:02AL 1-1,153-167,240-265,628-641| PSIPRED ccccEEEEEccccEEEEHHHcccHHHccccccccEEEEEcccEEEEEEEEEEEEEEccccEEEEEEccccEEEEEEccccccccccccEEEEccccEEEcccEEEEEcHHHHHHcccccEEEEEEEcHHHcccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHcccEEEEEEEccHHHccHHHHHcccccEEEEEEccEEEEEEccccHHHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHcccccEEEEcccEEEccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHEEcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccc //