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Lactobacillus salivarius UCC118 (lsal0)
Gene : trmD
DDBJ      :trmD         tRNA (Guanine-N(1)-)-methyltransferase
Swiss-Prot:TRMD_LACS1   RecName: Full=tRNA (guanine-N(1)-)-methyltransferase;         EC=2.1.1.31;AltName: Full=M1G-methyltransferase;AltName: Full=tRNA [GM37] methyltransferase;

Homologs  Archaea  0/68 : Bacteria  904/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.116.1
:250 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->247 1uamA PDBj 7e-63 48.2 %
:RPS:PDB   10->174 2absA PDBj 1e-04 9.8 %
:RPS:PDB   162->245 2btlA PDBj 2e-30 15.5 %
:RPS:SCOP  1->231 1oy5A  c.116.1.4 * 3e-74 42.1 %
:HMM:SCOP  1->248 1ualA_ c.116.1.4 * 1.6e-98 53.2 %
:RPS:PFM   21->219 PF01746 * tRNA_m1G_MT 5e-66 59.6 %
:HMM:PFM   22->219 PF01746 * tRNA_m1G_MT 6.6e-60 51.9 185/186  
:BLT:SWISS 1->250 TRMD_LACS1 e-146 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99443.1 GT:GENE trmD GT:PRODUCT tRNA (Guanine-N(1)-)-methyltransferase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 677360..678112 GB:FROM 677360 GB:TO 678112 GB:DIRECTION + GB:GENE trmD GB:PRODUCT tRNA (Guanine-N(1)-)-methyltransferase GB:NOTE COG0336 [J] tRNA-(guanine-N1)-methyltransferase GB:PROTEIN_ID ABD99443.1 GB:DB_XREF GI:90820804 GB:GENE:GENE trmD LENGTH 250 SQ:AASEQ MKIDILSLFPEMFGPLTESIVGKAVEKDILDIEVTNFRDFTTNKQNHVDDYPYGGGAGMLLQAQPIYDALDNIEEKNGNLGRVILLDPAGRKFDQSVAEELSKEDHLTFICGHYEGYDERIRAKVTDEISLGDFVLTGGELGAMVVIDATVRLLPDVLGNNESASGDSFSMGLLEYPQYTRPSNFRGMEVPEVLLSGNHQKIAEWRKKESLRRTYQRRPDLLEEYEFSDKEKEWLREFERDKDVKIHGKG GT:EXON 1|1-250:0| SW:ID TRMD_LACS1 SW:DE RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.31;AltName: Full=M1G-methyltransferase;AltName: Full=tRNA [GM37] methyltransferase; SW:GN Name=trmD; OrderedLocusNames=LSL_0633; SW:KW Complete proteome; Cytoplasm; Methyltransferase;S-adenosyl-L-methionine; Transferase; tRNA processing. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->250|TRMD_LACS1|e-146|100.0|250/250| GO:SWS:NREP 4 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0008168|"GO:methyltransferase activity"|Methyltransferase| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| GO:SWS GO:0008033|"GO:tRNA processing"|tRNA processing| BL:PDB:NREP 1 BL:PDB:REP 1->247|1uamA|7e-63|48.2|245/250| RP:PDB:NREP 2 RP:PDB:REP 10->174|2absA|1e-04|9.8|164/340| RP:PDB:REP 162->245|2btlA|2e-30|15.5|84/134| RP:PFM:NREP 1 RP:PFM:REP 21->219|PF01746|5e-66|59.6|193/193|tRNA_m1G_MT| HM:PFM:NREP 1 HM:PFM:REP 22->219|PF01746|6.6e-60|51.9|185/186|tRNA_m1G_MT| RP:SCP:NREP 1 RP:SCP:REP 1->231|1oy5A|3e-74|42.1|214/218|c.116.1.4| HM:SCP:REP 1->248|1ualA_|1.6e-98|53.2|248/252|c.116.1.4|1/1|alpha/beta knot| OP:NHOMO 909 OP:NHOMOORG 904 OP:PATTERN -------------------------------------------------------------------- 1111111111111211111-11111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111121111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111121111111111111111111111111111111111111111111111111111111111-1111111111111111111111111211-1111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111-1111111111111111111111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 247 STR:RPRED 98.8 SQ:SECSTR EEEEEEcccTTcccEEEEEEEETTEEEEEEEcGGGGGccccTTHHHHTTTccEEEEcccccccTTTccccccccccccEEEEEEcccccccGGGEHcEEEEEEEEEEEEcccccccEEEEEEEEEcTTcccEEEEEEEEEccccccccccccccEEEEEETcccccccccccEEEccTTcccccEEcccccccccccGGGcEEEEEEEEEEEEccccEEEEEEEEEEEETTccTTTTccTTcccTcc### DISOP:02AL 241-251| PSIPRED cEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEcHHHHccccccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEccccccccHHHHHHHHccccEEEEEccHHHHHHHHHHHHccEEEcccEEEcccHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccccccccccccHHHccccHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHccc //