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Lactobacillus salivarius UCC118 (lsal0)
Gene : truA
DDBJ      :truA         tRNA pseudouridine synthase A
Swiss-Prot:TRUA_LACS1   RecName: Full=tRNA pseudouridine synthase A;         EC=5.4.99.12;AltName: Full=tRNA-uridine isomerase I;AltName: Full=tRNA pseudouridylate synthase I;

Homologs  Archaea  36/68 : Bacteria  882/915 : Eukaryota  116/199 : Viruses  0/175   --->[See Alignment]
d.265.1
:256 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->252 1vs3A PDBj 5e-31 35.9 %
:RPS:PDB   3->255 1dj0A PDBj 2e-75 33.3 %
:RPS:SCOP  3->255 1dj0A  d.265.1.1 * 7e-76 33.3 %
:HMM:SCOP  2->258 1dj0A_ d.265.1.1 * 1.2e-77 43.5 %
:RPS:PFM   7->107 PF01416 * PseudoU_synth_1 1e-13 48.9 %
:RPS:PFM   165->208 PF01416 * PseudoU_synth_1 8e-04 40.9 %
:HMM:PFM   9->106 PF01416 * PseudoU_synth_1 1.5e-15 46.9 81/105  
:HMM:PFM   149->250 PF01416 * PseudoU_synth_1 2.5e-23 37.4 99/105  
:BLT:SWISS 1->256 TRUA_LACS1 e-151 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE00208.1 GT:GENE truA GT:PRODUCT tRNA pseudouridine synthase A GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1478890..1479660) GB:FROM 1478890 GB:TO 1479660 GB:DIRECTION - GB:GENE truA GB:PRODUCT tRNA pseudouridine synthase A GB:NOTE COG0101 [J] Pseudouridylate synthase GB:PROTEIN_ID ABE00208.1 GB:DB_XREF GI:90821569 GB:GENE:GENE truA LENGTH 256 SQ:AASEQ MTQRFKVTLAYDGTNFAGFQAQPNQRTVQFVLEKAINKMSKKDEYITVYGSGRTDSGVHALGQVVHFDFPHPISAKGMLRGLNSMLPLDCEVVDCKIVPNDFHSRYTTHGKRYLYRVSRGEFVNPFKRLYTGHYKYPLDIEKIKEAMPDVEGTHDYSSFVASGSQAKSHVRTIYEAKVYEDKVNDEIVFEFYGNGFLYNQVRIMVATLLEIGNGKRPVHDFLRLYEVKDRSQARQTAPASGLYLKEVYYDEEDEKL GT:EXON 1|1-256:0| SW:ID TRUA_LACS1 SW:DE RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12;AltName: Full=tRNA-uridine isomerase I;AltName: Full=tRNA pseudouridylate synthase I; SW:GN Name=truA; OrderedLocusNames=LSL_1404; SW:KW Complete proteome; Isomerase; tRNA processing. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->256|TRUA_LACS1|e-151|100.0|256/256| GO:SWS:NREP 2 GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| GO:SWS GO:0008033|"GO:tRNA processing"|tRNA processing| BL:PDB:NREP 1 BL:PDB:REP 3->252|1vs3A|5e-31|35.9|245/249| RP:PDB:NREP 1 RP:PDB:REP 3->255|1dj0A|2e-75|33.3|249/264| RP:PFM:NREP 2 RP:PFM:REP 7->107|PF01416|1e-13|48.9|94/112|PseudoU_synth_1| RP:PFM:REP 165->208|PF01416|8e-04|40.9|36/112|PseudoU_synth_1| HM:PFM:NREP 2 HM:PFM:REP 9->106|PF01416|1.5e-15|46.9|81/105|PseudoU_synth_1| HM:PFM:REP 149->250|PF01416|2.5e-23|37.4|99/105|PseudoU_synth_1| GO:PFM:NREP 8 GO:PFM GO:0001522|"GO:pseudouridine synthesis"|PF01416|IPR020097| GO:PFM GO:0003723|"GO:RNA binding"|PF01416|IPR020097| GO:PFM GO:0009451|"GO:RNA modification"|PF01416|IPR020097| GO:PFM GO:0009982|"GO:pseudouridine synthase activity"|PF01416|IPR020097| GO:PFM GO:0001522|"GO:pseudouridine synthesis"|PF01416|IPR020097| GO:PFM GO:0003723|"GO:RNA binding"|PF01416|IPR020097| GO:PFM GO:0009451|"GO:RNA modification"|PF01416|IPR020097| GO:PFM GO:0009982|"GO:pseudouridine synthase activity"|PF01416|IPR020097| RP:SCP:NREP 1 RP:SCP:REP 3->255|1dj0A|7e-76|33.3|249/264|d.265.1.1| HM:SCP:REP 2->258|1dj0A_|1.2e-77|43.5|253/264|d.265.1.1|1/1|Pseudouridine synthase| OP:NHOMO 1191 OP:NHOMOORG 1034 OP:PATTERN ------------------11-1111--1111-111-1-1111-11-111111111111111-1----- 111-111111111111111-111111111111111111111111-1111111111-11111111111111111111111111111111111111-111111112211112-1111111-11111211111111111111111111111111111111111111111111111111111111111111111-111-2222222222222211111122211111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111321122222221211211222232111-321111111121111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111112121111111111111111111222221211111-1111111111111111111111111111111111111111111111-111111--111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111-11111111111111111111111111111111111-111111111111111111-1111111111111111---1--11----111--1111111111111111 ---1121-111------------------------------------1-----1--------111111111-11---1--11111111-1-----1---1---22211222232221111-12134131594-223-1-211111-11111--12111311-21-11213A--121224E433122223-431322323 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 253 STR:RPRED 98.8 SQ:SECSTR ##EEEEEEEEEccTTccccccTTccccHHHHHHHHHHHHHTccccccEEEcccccTTcEEEEEEEEEEEcccccHHHHHHHHHHTccTTEEEEEEEEccTTccTTTTccEEEEEEEEEcccccccTTTTccEEccccccHHHHHHHHGGGcEEEEcGGGccTTccccccEEEEEEEEEEEEccTTEEEEEEEEccccTTHHHHHHHHHHHHHTTcccTTHHHHHHHHccGGGcccccccTTEEEEEEEccGGGcc# DISOP:02AL 1-1| PSIPRED ccEEEEEEEEEccccccccccccccccHHHHHHHHHHHHcccccEEEEEEEcccccccccccEEEEEEEcccccHHHHHHHHHHHccccEEEEEEEEccccccccccccEEEEEEEEEccccccHHHcccEEcccccccHHHHHHHHHHHcccccHHHHHcccccccccEEEEEEEEEEEcccccEEEEEEEEEHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccccEEEEcccccccccc //