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Lactobacillus salivarius UCC118 (lsal0)
Gene : xerC.1
DDBJ      :xerC         Phage integrase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  231/915 : Eukaryota  0/199 : Viruses  30/175   --->[See Alignment]
a.60.9d.163.1
:381 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   61->167 2kd1A PDBj 8e-07 22.4 %
:BLT:PDB   179->365 2a3vB PDBj 1e-11 34.3 %
:RPS:PDB   67->374 3crxA PDBj 5e-27 11.1 %
:RPS:SCOP  70->166 1crxA1  a.60.9.1 * 6e-04 12.6 %
:RPS:SCOP  175->374 1crxA2  d.163.1.1 * 2e-22 10.9 %
:HMM:SCOP  176->373 1a0pA2 d.163.1.1 * 5.7e-41 28.1 %
:RPS:PFM   201->367 PF00589 * Phage_integrase 7e-14 31.7 %
:HMM:PFM   177->366 PF00589 * Phage_integrase 5.1e-34 26.5 170/173  
:BLT:SWISS 55->368 XERCL_THETN 3e-20 25.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99051.1 GT:GENE xerC.1 GT:PRODUCT Phage integrase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(289941..291086) GB:FROM 289941 GB:TO 291086 GB:DIRECTION - GB:GENE xerC GB:PRODUCT Phage integrase GB:NOTE COG0582 [L] Integrase GB:PROTEIN_ID ABD99051.1 GB:DB_XREF GI:90820412 GB:GENE:GENE xerC LENGTH 381 SQ:AASEQ MATFRKYKTKKGMLWRYQILVGTDTVTGKRKYKTKGGFYTKKEAKLAADEIEKKISNPTFLDNENITFGEVYDRWIVNYKLTVKESSFYTVELQYKSKILPILGNKKINQITTIECQDLINYWYSIPLKNYKAIFNLITRIFKYAKQLKIVTDDPTSSVIIPKASRQFNNLEHSRNYYTRDELKTFLEYAEKHEKHKIYVLFRLLAFSGMRKSEALALTWNDIDFEKAQITINKTIILVSKVKVTTPKTKSSNRTVFIDKKTVSILREWRLSQKKELLQKGFNALSPNQLVFPDKNNHYIIPTTISKMMNRVSEGSNLHHITVHGLRHTYATLAAQGGMSVKQLQAQLGHSKVEITLDVYTSITDEQRKDTANQYTSFVNF GT:EXON 1|1-381:0| BL:SWS:NREP 1 BL:SWS:REP 55->368|XERCL_THETN|3e-20|25.7|307/391| SEG 27->42|tgkrkyktkggfytkk| SEG 239->252|vskvkvttpktkss| BL:PDB:NREP 2 BL:PDB:REP 61->167|2kd1A|8e-07|22.4|107/118| BL:PDB:REP 179->365|2a3vB|1e-11|34.3|169/320| RP:PDB:NREP 1 RP:PDB:REP 67->374|3crxA|5e-27|11.1|305/323| RP:PFM:NREP 1 RP:PFM:REP 201->367|PF00589|7e-14|31.7|145/168|Phage_integrase| HM:PFM:NREP 1 HM:PFM:REP 177->366|PF00589|5.1e-34|26.5|170/173|Phage_integrase| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 2 RP:SCP:REP 70->166|1crxA1|6e-04|12.6|95/110|a.60.9.1| RP:SCP:REP 175->374|1crxA2|2e-22|10.9|192/212|d.163.1.1| HM:SCP:REP 176->373|1a0pA2|5.7e-41|28.1|178/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 532 OP:NHOMOORG 269 OP:PATTERN ----1-----------1---------------1------2------1--------------111---- ------------1-1----------1-------2-2---1--23------------------1----111--11111111123------111---1------1---1----------1------------------------12-2--1--------------------1-------------3--1-1--12-223233-1222-111-13311-2211322--7-11341-35614125125552211331B2-116-2-134422441621--65756542212221--113123--2355535422212146222445441213211-1--512462211--12311-261-3133-11-111224--1--------------1------------------------1------1---------------1--------------------------1-------------------------------------------------------------------------------------------------------------12------1-------------1-------1----------1---------3---------1-------------------------------1----------------------------------------------------1---1--11-1111-1-------------------------------2--1-----------------11--------1-----------1----------------------------11---------------------111111----------1------1--1---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -1-------------1-------------------------------------------------------------1----1111111---------1111---1111111----1---1-1--1-1--1-1--11-------------------------------------- STR:NPRED 315 STR:RPRED 82.7 SQ:SECSTR ############################################################cccccHcHHHHHHHHHHHHHTGcGGccHHHHHHHHHHHHHHHHHTcccccccHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHTTTcccGGGcHHHHHHHHHHHHHHHHTcccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHTccHHHHHHcccTTEEEcccccEEEcccccccccccccccccccHHHHHHHHHHHHHHcGGGcTTccccEEcTTccEEccccccccHHHHHHHHHHHHHHHHccccccccccccTTHHHHHHHHHHHHTcccHHHHHHHTTcccHHHHHHHHcTTccccccHHHHHH###### DISOP:02AL 1-1,58-58,168-168| PSIPRED ccccEEEEcccccEEEEEEEEcccccccccHHccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccHHHccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHcccHHHHcccccEEEEcccEEEEEEEEEcccccccccEEEEccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccccHHHHHHHHHHHHHHccccccEEcccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHHccc //