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Lactobacillus salivarius UCC118 (lsal0)
Gene : xerC.2
DDBJ      :xerC         Phage integrase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  238/915 : Eukaryota  0/199 : Viruses  27/175   --->[See Alignment]
d.163.1
:373 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   61->148 2khqA PDBj 9e-13 33.0 %
:BLT:PDB   278->342 2a3vB PDBj 2e-07 33.3 %
:RPS:PDB   61->326 5crxB PDBj 1e-25 8.4 %
:RPS:SCOP  61->349 1p7dA  d.163.1.1 * 2e-21 13.6 %
:HMM:SCOP  166->350 1a0pA2 d.163.1.1 * 6.6e-34 28.3 %
:RPS:PFM   193->342 PF00589 * Phage_integrase 5e-15 29.9 %
:HMM:PFM   167->338 PF00589 * Phage_integrase 1e-30 27.5 160/173  
:HMM:PFM   35->187 PF04286 * DUF445 2.2e-05 15.5 129/367  
:BLT:SWISS 7->94 HEXB_ENTHI 6e-04 35.2 %
:BLT:SWISS 68->356 VINT_BPL54 1e-20 27.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99539.1 GT:GENE xerC.2 GT:PRODUCT Phage integrase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(777765..778886) GB:FROM 777765 GB:TO 778886 GB:DIRECTION - GB:GENE xerC GB:PRODUCT Phage integrase GB:NOTE COG0582 [L] Integrase GB:PROTEIN_ID ABD99539.1 GB:DB_XREF GI:90820900 GB:GENE:GENE xerC LENGTH 373 SQ:AASEQ MGTIIKRGKTYRATVLWYEDGVRKFKSKSGFKTKREAQIYANELENLKARNFISQNSKTPFPEYFWSWFETYKESSVSERTKLTYKNTFNVLKKHLGGIPIEEMDRRLYRKFIAEFGKDHAKSTVSKFNSLYHACVKDAMYDGDMTKDFIAGTDIVYNRKKTRKIDYLNIEETKKLTNYLTDTLNHNFTAKYMILLAIATGARLGEMQALTWKDINFHTIDINKSWNETTKKFQPTKNESSKRIIRVNQNTLDYLQDLKQNNHDMVFINQYNTIPTSSAVNKTLRMCLKELGIDKPSFHFHSLRHTHVAYLLSENIDLYIISKRLGHSDISTTSRVYSYLIDEYKNRADNKIENIVDKLFDDTVDDKKNSINY GT:EXON 1|1-373:0| BL:SWS:NREP 2 BL:SWS:REP 7->94|HEXB_ENTHI|6e-04|35.2|71/565| BL:SWS:REP 68->356|VINT_BPL54|1e-20|27.4|288/354| BL:PDB:NREP 2 BL:PDB:REP 61->148|2khqA|9e-13|33.0|88/110| BL:PDB:REP 278->342|2a3vB|2e-07|33.3|63/320| RP:PDB:NREP 1 RP:PDB:REP 61->326|5crxB|1e-25|8.4|262/296| RP:PFM:NREP 1 RP:PFM:REP 193->342|PF00589|5e-15|29.9|144/168|Phage_integrase| HM:PFM:NREP 2 HM:PFM:REP 167->338|PF00589|1e-30|27.5|160/173|Phage_integrase| HM:PFM:REP 35->187|PF04286|2.2e-05|15.5|129/367|DUF445| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 1 RP:SCP:REP 61->349|1p7dA|2e-21|13.6|273/280|d.163.1.1| HM:SCP:REP 166->350|1a0pA2|6.6e-34|28.3|173/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 613 OP:NHOMOORG 266 OP:PATTERN ---------------------------------1---------------------------------- -------------------------------------1---1--1-------------------------------1111-12-----2123-3-1-----31---1----------------------1-----------121---------------------------------------1------11--34445422333222212332213212342--8122262-68835337337784346654C31126-4214544334295-11576656321-2221--1131221-12443255111-225421244543222221112225423333111--22211221-2124-21312-214--1-1---------------1---------------------------1---1---------------------------------------1------------------1-------1----------1--------1---------------1----------------------------------------------121-----1--1---1-1---22------111--1-------11-------2---------1------1---------------------1--1-----------------------------------------------------------------------------------------------------111--1-------------11-121111------------------------------------5-----1--11----------------1-----------------1------1-------------------1----1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -1---------------------------------------------------------------------------1----11111-1---------1111---1111-11-1--1---1----1-1--1-1--11-------------------------------------- STR:NPRED 312 STR:RPRED 83.6 SQ:SECSTR #########################################################ccHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHTTccccGGGcHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHcccHHHHTTccGGGEEEcETTETTccEEEEEEEETTEEEEEEEEEEccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccccTTHHHHHHHHHHHTTTccHHHHHHHHccccHHHHHHHHHTTccTTccHHHHHHTcccHHHHTTTEEEGGG#### DISOP:02AL 362-374| PSIPRED cEEEEEccEEEEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHccccccccccccEEEEEEEccccEEEccccccccEEEEccHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccccc //