[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Mesorhizobium loti MAFF303099 (mlot0)
Gene : mll0037
DDBJ      :mll0037      probable outer membrane protein B; OmpB
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  6/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.80.1
:314 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  4->311 1ru4A_ b.80.1.9 * 1.1e-15 27.2 %
:BLT:SWISS 9->194 OMPB_RICJA 7e-06 28.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAB47710.1 GT:GENE mll0037 GT:PRODUCT probable outer membrane protein B; OmpB GT:DATABASE GIB00042CH01 GT:ORG mlot0 GB:ACCESSION GIB00042CH01 GB:LOCATION complement(30662..31606) GB:FROM 30662 GB:TO 31606 GB:DIRECTION - GB:GENE mll0037 GB:PRODUCT probable outer membrane protein B; OmpB GB:PROTEIN_ID BAB47710.1 LENGTH 314 SQ:AASEQ MLLLASVFLIAPASAQATRTWVSGVGNDADPCSRTAPCKTFAGAISKTATAGEINCLDPGGFGTVTITKSITIDCKTTEGGVLSALVNGIVVNTPVGSVVHLRGLDIDGAGTGLDGVRMTGQGQLHIEDCNIERVTSNGVEFLPNGASELYISNTRIAEAVGGAILIKTTGAVGINAILSRVELTNSANGILVDGTGNTSAMNMALTDSLVSGNTGNGVAVKSVAAASSVRATIVNTTISSNAGIGVNANGAAASGAGSAIAFLGASTVFGNVTGVSNTGSGAVQSFKNNMISGNVADGTPITAFPGPGGTPLQ GT:EXON 1|1-314:0| BL:SWS:NREP 1 BL:SWS:REP 9->194|OMPB_RICJA|7e-06|28.7|171/100| SEG 219->230|vavksvaaassv| SEG 240->267|ssnagigvnangaaasgagsaiaflgas| HM:SCP:REP 4->311|1ru4A_|1.1e-15|27.2|290/0|b.80.1.9|1/1|Pectin lyase-like| OP:NHOMO 10 OP:NHOMOORG 7 OP:PATTERN -------------------------------------------------------------------- -2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2------------------------1--1---2---------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 311-314| PSIPRED cEEEEEEHHHccccccEEEEEEEcccccccccccccccccccccccccccccEEEEEcccccEEEEEEEEEEEEEEEEEccEEEccccEEEEEcccccEEEEEEEEEccccccccEEEEEEccEEEEEEEEEEEEccccEEEccccccEEEEEccEEEEcccccEEEEEEccccEEEEEEEEEEEEcccEEEEEccccEEEEccccEEEEEcccccccEEEEEEEEcccEEEEEEEccccccccccEEcccccHHHcccEEEEEcccEEEEEEccccccccHHHHHHHHccccccccccccEEEcccccccccc //