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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54847.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  122/915 : Eukaryota  17/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:329 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->182 1vj5A PDBj 4e-09 28.8 %
:RPS:PDB   24->312 1bn6A PDBj 2e-12 14.4 %
:RPS:SCOP  36->310 1mt3A  c.69.1.7 * 8e-12 12.2 %
:HMM:SCOP  26->310 1q0rA_ c.69.1.28 * 8.4e-42 31.0 %
:HMM:PFM   75->303 PF00561 * Abhydrolase_1 4.6e-19 23.5 217/231  
:HMM:PFM   34->62 PF06441 * EHN 2.5e-05 37.9 29/112  
:BLT:SWISS 36->310 EPHD_MYCTU 8e-38 34.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54847.1 GT:GENE BAD54847.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 6336..7325 GB:FROM 6336 GB:TO 7325 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD54847.1 LENGTH 329 SQ:AASEQ MSSTPGSPTSRSAAAMTATRAESPFASGTVVRRGDVELAVFQCGDPAAPPLLLIHGWPDTHLLWNEVAARLAGRFRVIAFDNRGAGASTVPAEVAAYRIEELAADVLAVLDAVVPDERVHILGHDWGSVIGWEVVSTPGAAERIASFTSLSGPNLDFLGAYLRGPVSARRLRGALEQGVASAYTVAFQIPGLPVPVMRLLSRRWPRFLAFFDGLDAAAVPAAPTLPADMINNLKLYRANIRARLRHPRPRPVEVPVQVLIATGDRAVRPVVHEEAERWVRDLTRTEIRARHWSPLSHPDEVAGRTADYIEAITARAGTGTARPGQSEPS GT:EXON 1|1-329:0| BL:SWS:NREP 1 BL:SWS:REP 36->310|EPHD_MYCTU|8e-38|34.5|275/592| SEG 9->21|tsrsaaamtatra| SEG 100->117|eelaadvlavldavvpde| SEG 207->227|flaffdgldaaavpaaptlpa| SEG 243->258|rlrhprprpvevpvqv| SEG 313->322|taragtgtar| BL:PDB:NREP 1 BL:PDB:REP 23->182|1vj5A|4e-09|28.8|156/547| RP:PDB:NREP 1 RP:PDB:REP 24->312|1bn6A|2e-12|14.4|284/291| HM:PFM:NREP 2 HM:PFM:REP 75->303|PF00561|4.6e-19|23.5|217/231|Abhydrolase_1| HM:PFM:REP 34->62|PF06441|2.5e-05|37.9|29/112|EHN| RP:SCP:NREP 1 RP:SCP:REP 36->310|1mt3A|8e-12|12.2|271/293|c.69.1.7| HM:SCP:REP 26->310|1q0rA_|8.4e-42|31.0|281/297|c.69.1.28|1/1|alpha/beta-Hydrolases| OP:NHOMO 243 OP:NHOMOORG 143 OP:PATTERN ------------------------1--11-1------------------------------------- ----2---------33422-22112233333131111321---------------111---1---21222----------------------------------1---1-----------------------------------11-------------------1-----------------111----------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------112-----122------------11332211-11------1----------1-1-----1----------------1-------------------------------11-1--111-22222212332221-5555242111-11--22---------------------------------------------------------------1---------------------------------1---------------------------------------------------------------------------------------------------------------------------------------1------------------1111111-----2212-1-11----------------------------------------------------1111-----------------------------------------------1- -------------------------------------------------1---------------------------------------------------------1---12112-----------------------------------------1-------1---37---1----4-----------1--2-33- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 290 STR:RPRED 88.1 SQ:SECSTR ######################cccccEEEEETTcEEEEEEEEcccccccEEEEccTTccGGGGTTTHHHHTTTccEEEEccTTcTTcccccccGGcccHHHHHHHHHHHHHHTTcccEEEEEEEHHHHHHHHHHHHcGGGEEEEEEEEEccccccGGGccHHHHHHHHHHTcTTHHHHHHHTTccHHHHTHHHHTccccccHHHHHHHHGGGccGGGGHHHHHHHHHcccTTccHHHHHHHHHHHHHHHHccccEEEEEEEEcccccHHHHHHHHHHcTTEEEEEEEEcccGGGTcHHHHHHHHHHHGGGG################# DISOP:02AL 1-6, 8-23, 313-329| PSIPRED ccccccccccccccccccccccccccccEEEEEccEEEEEEEEccccccEEEEEEcccccHHHHHHHHHHHHcccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHccccHHHHHEEHEEccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc //