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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54850.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  49/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:389 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   272->387 PF12089 * DUF3566 8e-35 56.0 %
:HMM:PFM   272->387 PF12089 * DUF3566 9.2e-46 44.8 116/120  
:BLT:SWISS 272->389 Y007_MYCTU 6e-31 51.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54850.1 GT:GENE BAD54850.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 12243..13412 GB:FROM 12243 GB:TO 13412 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD54850.1 LENGTH 389 SQ:AASEQ MTTPNQPNDGHQNNGVTERIAPSPIPPRPVPRPGSAESGPQGGGRPGGQSPENPQRQGDFAPGAEQPGGPSDQETVRMGGAAGKPQGGQEPGADTAPGGQPQSGQGGPQNGQQQGGQAQGQQGGQPQGQQGGQPQGQQGGQAQGQERYQEGWSQLPQREPQSNLYRPGQSPVAGRPPSGGGVGLNGGVSNARTTADLAAKAARKEAAMVKSVGIDGPTRSIARPELIKDMPDLSEIRHPLPPSDKTSNTGAQQAVSPAVPVAVAAAVAGGEPLRATVQIRRIDPWSTLKISLVISVALFFVWMLAVGLLYIVLEGMGVWERLNNTFTDMVSQDSGSAGLIDAGTVFGYAGVIGLINVVLFTALGTVGTFIYNQCCDLVGGIQVTLADPD GT:EXON 1|1-389:0| BL:SWS:NREP 1 BL:SWS:REP 272->389|Y007_MYCTU|6e-31|51.7|118/304| TM:NTM 3 TM:REGION 251->273| TM:REGION 290->312| TM:REGION 342->364| SEG 20->36|iapspipprpvprpgsa| SEG 38->51|sgpqgggrpggqsp| SEG 96->145|apggqpqsgqggpqngqqqggqaqgqqggqpqgqqggqpqgqqggqaqgq| SEG 170->189|spvagrppsgggvglnggvs| SEG 191->207|arttadlaakaarkeaa| SEG 251->268|aqqavspavpvavaaava| RP:PFM:NREP 1 RP:PFM:REP 272->387|PF12089|8e-35|56.0|116/120|DUF3566| HM:PFM:NREP 1 HM:PFM:REP 272->387|PF12089|9.2e-46|44.8|116/120|DUF3566| OP:NHOMO 50 OP:NHOMOORG 49 OP:PATTERN -------------------------------------------------------------------- --------1111--11112-11111111111111111111---11---1--111---1--1111111-111-111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-278, 388-389| PSIPRED ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEccc //