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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54865.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.81.1c.37.1
:433 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   7->121 2r5uF PDBj 4e-07 24.3 %
:BLT:PDB   103->249 2zudB PDBj 2e-04 29.0 %
:RPS:PDB   6->105 1b79A PDBj 2e-15 21.0 %
:RPS:PDB   176->379 3dvlC PDBj 5e-09 14.8 %
:RPS:SCOP  6->105 1b79A  a.81.1.1 * 7e-16 21.0 %
:HMM:SCOP  1->114 1jweA_ a.81.1.1 * 1.2e-18 25.4 %
:HMM:SCOP  164->402 1n0wA_ c.37.1.11 * 1.1e-13 24.4 %
:RPS:PFM   6->74 PF00772 * DnaB 2e-07 31.9 %
:RPS:PFM   162->257 PF01580 * FtsK_SpoIIIE 1e-04 35.6 %
:HMM:PFM   6->76 PF00772 * DnaB 3.4e-10 28.2 71/103  
:HMM:PFM   188->213 PF05729 * NACHT 0.00056 38.5 26/166  
:BLT:SWISS 7->121 DNAB_MYCTU 1e-06 24.3 %
:BLT:SWISS 105->265 RADA_DESK1 7e-05 30.8 %
:COIL

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54865.1 GT:GENE BAD54865.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 22004..23305 GB:FROM 22004 GB:TO 23305 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD54865.1 LENGTH 433 SQ:AASEQ MSEEGYDLTAERALLGTAMSAPDQIRDVFLAVQPDDWYHHTTRELAGVITGMMRAGRPIDANTTMVEAQNRGLVPGRIPLDFALRCYEAAALPESAAVHAQRIRELSAARKLSQIGLRIAQRMESAWSTGIDRMDVTAAIKQARQALDEAEQITADVAAEPPMPMGKFLSIPDTHDWLVPGLLERMDRVVLTGAEGGGKSVLCSQIAATLAAGLHPFTANPLGSGTLHTRVLVIDCENSPTQARRRYRWITAMIDQRRRNHGLTPIDWNDTMSIEVRPAGIDLLTGLDAAWLERQISAFAPDLVVLGPLYKLHHENPNEEKPAREIAWILDGLRERHGFALLTEAHAGKTTAGDGRRNMAPIGSSVWLRWPEFGFGMRRSDDDPGRGRAQKVDVVSWRGSREERSWPSKLHHAAILPWMPADPDYYETIPRSA GT:EXON 1|1-433:0| BL:SWS:NREP 2 BL:SWS:REP 7->121|DNAB_MYCTU|1e-06|24.3|115/874| BL:SWS:REP 105->265|RADA_DESK1|7e-05|30.8|143/328| COIL:NAA 28 COIL:NSEG 1 COIL:REGION 133->160| BL:PDB:NREP 2 BL:PDB:REP 7->121|2r5uF|4e-07|24.3|115/140| BL:PDB:REP 103->249|2zudB|2e-04|29.0|131/297| RP:PDB:NREP 2 RP:PDB:REP 6->105|1b79A|2e-15|21.0|100/102| RP:PDB:REP 176->379|3dvlC|5e-09|14.8|189/486| RP:PFM:NREP 2 RP:PFM:REP 6->74|PF00772|2e-07|31.9|69/103|DnaB| RP:PFM:REP 162->257|PF01580|1e-04|35.6|87/186|FtsK_SpoIIIE| HM:PFM:NREP 2 HM:PFM:REP 6->76|PF00772|3.4e-10|28.2|71/103|DnaB| HM:PFM:REP 188->213|PF05729|0.00056|38.5|26/166|NACHT| GO:PFM:NREP 10 GO:PFM GO:0003678|"GO:DNA helicase activity"|PF00772|IPR007693| GO:PFM GO:0005524|"GO:ATP binding"|PF00772|IPR007693| GO:PFM GO:0006260|"GO:DNA replication"|PF00772|IPR007693| GO:PFM GO:0000166|"GO:nucleotide binding"|PF01580|IPR002543| GO:PFM GO:0003677|"GO:DNA binding"|PF01580|IPR002543| GO:PFM GO:0005524|"GO:ATP binding"|PF01580|IPR002543| GO:PFM GO:0007049|"GO:cell cycle"|PF01580|IPR002543| GO:PFM GO:0007059|"GO:chromosome segregation"|PF01580|IPR002543| GO:PFM GO:0016021|"GO:integral to membrane"|PF01580|IPR002543| GO:PFM GO:0051301|"GO:cell division"|PF01580|IPR002543| RP:SCP:NREP 1 RP:SCP:REP 6->105|1b79A|7e-16|21.0|100/102|a.81.1.1| HM:SCP:REP 1->114|1jweA_|1.2e-18|25.4|114/114|a.81.1.1|1/1|N-terminal domain of DnaB helicase| HM:SCP:REP 164->402|1n0wA_|1.1e-13|24.4|209/0|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 154-162, 314-322, 350-360, 379-386, 432-433| PSIPRED cccccccHHHHHHHHHHHHccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHccccHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEccccHHHHHHHHHHHHccHHHHHHHccccHHHHccEEEEEcccccccccHHHHHHHHHHHHHHHccEEEEEEcHHHHHccccccHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccHHHcccHHHEEcHHHHcccccccccccHHHHHEEEEEEccccccccHHHHHHHcccccccccccccHHHcccccc //