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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54881.1
DDBJ      :             putative phage terminase large subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  160/915 : Eukaryota  1/199 : Viruses  21/175   --->[See Alignment]
:582 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   90->561 PF03354 * Terminase_1 1e-79 40.6 %
:HMM:PFM   90->565 PF03354 * Terminase_1 1.1e-84 30.6 458/477  
:BLT:SWISS 57->563 TERL_BPSF5 8e-62 34.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54881.1 GT:GENE BAD54881.1 GT:PRODUCT putative phage terminase large subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 28359..30107 GB:FROM 28359 GB:TO 30107 GB:DIRECTION + GB:PRODUCT putative phage terminase large subunit GB:PROTEIN_ID BAD54881.1 LENGTH 582 SQ:AASEQ MTRTTRSAEVELPDSEELDRLKLSPEVAWYLVSRGIPLPDCPPRWKTPEPREEPGARFDPDRVDKVLATFRALRHTKGRLAGRPLIPDSWQVAYILAPAFGWVHLDEDFGIYVRIIRTLYVELPRKNGKSTLAGGIGIYLTAADGEEGAQVIAAATRLDQAQFVFAPIKLLAEKSPALRKHVTPYKAKIVHNRTASYFQPVANAGDAQHGADLHGGIVDELHLHKTNELVEAIETGTGSRTQPLIVFITTADDSRKETPYDRKRGLVEQLARGVLKDATTYGVIWAADENAEGFDPYSEEAQRAANPGFGISPTRAFLRQAAVKAQQSPADDASYRRLHLGIRTKQAVKYLDIEAWDRNASIVDEERLRGRACYGGLDLAATSDLTALAWAFPDADRGGFDVLWRIWIPERGLRELDKRTAGGASVWAKRGYLTVTPGDVADYDFIRSTIVTDSEKFDVREIAYDRWNSTQLVNDLTADGAPMVTMGQGYASMSAPTKELQRLVLLGTEQAPMVRHGGNPAARWTVDNFAVAQDDAGNVKPSKANAGDKIDPVVALIMAIGRATEAPAPKRSAYEDDGLMVV GT:EXON 1|1-582:0| BL:SWS:NREP 1 BL:SWS:REP 57->563|TERL_BPSF5|8e-62|34.2|486/577| SEG 377->389|ldlaatsdltala| RP:PFM:NREP 1 RP:PFM:REP 90->561|PF03354|1e-79|40.6|453/465|Terminase_1| HM:PFM:NREP 1 HM:PFM:REP 90->565|PF03354|1.1e-84|30.6|458/477|Terminase_1| OP:NHOMO 246 OP:NHOMOORG 182 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1--1------------------------1----------------1------1------------------1-----------------------------------1------------------------------------------------1-333331121-211--1-22----2-1-----1----121---2121-2111--1-----1----3------11113-1-------11---1---------1------1112--11-11------------2-111--23-112-2-22-111--1-----2--1---1----1-----------------------431----------------------61-1---1--3------1--------13122-1-11111111--1----------------------------------------11-------1---------212------------------2--1---1------------------1-1-------------111----------1-----------1-1---1-------------------------------1------1-1-------------------2---3--12-11-2-------2-4-1--11-----1-1-----11---121-------------11111---------------1------------1--1--11-----------------1------11----12--2-----------------------------1--------------------------------1-------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ---------------------------------------------------11-----------------------------------------1----1-----1--11--11-1---1--1------------------1-11--111111---------------------- DISOP:02AL 1-11, 205-207| PSIPRED ccccccccEEEccccccHHHEEccccEEEEEEcccEEHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHEEEEEccccccEEEEEEEEEEEEccccccHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHHHHHHcHHHHHHHHHcccEEEEcccccEEEEEEcccccccccccEEEEEEEHHHcccHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHcHHHHHHHHHHHcccEEccccccccHHHHHHHccccccccccccEEEEEEEcccccccEEEEEEEEEccccEEEEEEEEcccHHHHHHHHHHccccHHHHHHccEEEEcccccccHHHHHHHHHHHHHHccEEEEEccHHHHHHHHHHHHHccccEEEcccccccccHHHHHHHHHHHcccccccEEEEcccHHHHHHHccEEEEEcccccEEEccccccccccHHHHHHHHHHHHHHccccccccHHccccccc //