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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54883.1
DDBJ      :             putative phage portal protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  184/915 : Eukaryota  2/199 : Viruses  20/175   --->[See Alignment]
:423 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   40->372 PF04860 * Phage_portal 2e-37 31.5 %
:HMM:PFM   40->374 PF04860 * Phage_portal 2.5e-76 36.2 326/347  
:BLT:SWISS 38->384 Y759_RICBR 3e-22 25.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54883.1 GT:GENE BAD54883.1 GT:PRODUCT putative phage portal protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 30405..31676 GB:FROM 30405 GB:TO 31676 GB:DIRECTION + GB:PRODUCT putative phage portal protein GB:PROTEIN_ID BAD54883.1 LENGTH 423 SQ:AASEQ MPFVVNEGAIRSLSRPGTPTLPRVTIAEGLTLDYLTLWRKQPAVRTCVTFLARNIAQLGLHVFERRGDTDRVRLTEHELAELIDKPNPWTTRYRHMNALVHDLAIFDRAYWWKTKTDAGLGLVRLPPPLVTPKGENWLTPERFEVAGSKGKKEIPADEVVYFRGYSGTDDFGTSPIEALRQALAEEHSGSRMREQVMRNGARISGYLQRPLEAPEWSGDARERFRREWQAQYTGEGPQAGGTPILEDGMVFQAAAQTAKDLQYLEVRKLSREEVASAYFIPPPMIGILDHATFSNISEQHKMLYQDTLGPWLTMIAEEIALQLIPDIAAGDARIYVEFNLREKLTGAFEQRAAQMYQAAGTAWMTVNEVRALDNLPPVEGGDELIRPLNVTQNGDQNPIPAEPEPDEPEPDDDTGDDPEESAA GT:EXON 1|1-423:0| BL:SWS:NREP 1 BL:SWS:REP 38->384|Y759_RICBR|3e-22|25.1|339/385| SEG 119->132|glglvrlppplvtp| SEG 400->420|paepepdepepdddtgddpee| RP:PFM:NREP 1 RP:PFM:REP 40->372|PF04860|2e-37|31.5|324/340|Phage_portal| HM:PFM:NREP 1 HM:PFM:REP 40->374|PF04860|2.5e-76|36.2|326/347|Phage_portal| OP:NHOMO 266 OP:NHOMOORG 206 OP:PATTERN -------------------------------------------------------------------- ------1-----------------------------11--------------------------------------------------1------------------------------------------------------1----------------------------------------------1---11111-1-111111-1-22-----------------------2121-2111--1----------1--1----1112----------1-----------------------1-------------------1------131--1-1-11--11-12-----2--1--------1---------1-----------1-4421111111111111111-1----51-111-2111------1--11--113533213111111111--------111111111111--11--1------1-11-12-1-1--------1------11-111---1-----------1--1--1---1------------------1-1-------------111------------------------1---1-------------------------------1----------------------------2---2--54--1-2---3---214-1-411-----1-1-----11---121-------------11211---------------1------------1--1--11-------------1----------1-----12-12-----------------------------1----------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------2---------- ---------------------------------------------------11-----------------------------------------1-------1--1---1--11-1---1--1--------------------11--111111---------------1------ DISOP:02AL 394-423| PSIPRED cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccccEEEccccHHHHHHHcccccccHHHHHHHHHHHHHHcccEEEEEEEccccEEEEEccccEEEEEcccccEEEEEEEEccccEEEEcccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHccccccccccEEcccccHHccccccccccccccccccccccccccccccc //