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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54884.1
DDBJ      :             putative prohead protease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  84/915 : Eukaryota  0/199 : Viruses  5/175   --->[See Alignment]
:263 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   20->164 PF04586 * Peptidase_U35 6e-22 47.3 %
:HMM:PFM   21->169 PF04586 * Peptidase_U35 9e-35 33.6 134/163  
:BLT:SWISS 20->164 VP4_BPHK7 3e-11 33.1 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54884.1 GT:GENE BAD54884.1 GT:PRODUCT putative prohead protease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 31673..32464 GB:FROM 31673 GB:TO 32464 GB:DIRECTION + GB:PRODUCT putative prohead protease GB:PROTEIN_ID BAD54884.1 LENGTH 263 SQ:AASEQ MNTKACAVKVKAGPDAGLAEGEFIAYASVFGNKDSYGDVVQPGAFTDTLAAWAAKENPIPLLWGHNTADPDFNLGEVVEAIEDFHGLKVHGRLDMESPKSAQVYRLLKSGRVSQMSFAYSVIEGEWVEPVGEGKTYKDAYYSLKKLDLYEVSIVPIGANQETEILAVKAAASALRAKAGRVLSAKNETTIRDVKTQLEEASQALDEVLAAVATDENTDEQDQTSGKEPSPGKSAQTSAGKTTPNPVVSLASLDALAAEIECSA GT:EXON 1|1-263:0| BL:SWS:NREP 1 BL:SWS:REP 20->164|VP4_BPHK7|3e-11|33.1|133/225| COIL:NAA 33 COIL:NSEG 1 COIL:REGION 180->212| SEG 165->181|lavkaaasalrakagrv| SEG 248->257|slasldalaa| RP:PFM:NREP 1 RP:PFM:REP 20->164|PF04586|6e-22|47.3|129/149|Peptidase_U35| HM:PFM:NREP 1 HM:PFM:REP 21->169|PF04586|9e-35|33.6|134/163|Peptidase_U35| OP:NHOMO 99 OP:NHOMOORG 89 OP:PATTERN -------------------------------------------------------------------- ------1--------------1-----------1-211----------------------------------111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1---------------------------------------------------------------------------------1-------------51211111111-1-1111--21-11-1---1----2------1--1----1-1---12111111111--------1111111111--------1------1-11--1----------------------1-1------------------------------------------------------------1-1----------------------------------------------------------------------------------------------------1-1-------1------11-----1--------1----1----------------11-----------------------------1------1-------------1-----------------1--2----------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------1------------------------------------------------------------------------------------------11--1----1---------------------- DISOP:02AL 1-2, 210-242| PSIPRED ccEEEEEEEEEcccccccccEEEEEEEEEcccEEccccEEcccHHHHHHHHHHHcccccEEEEEccccccccccccEEEEEEcccEEEEEEEEccccHHHHHHHHHHHcccccEEEEEEEEEEcccccccccccccccEEEEEEEEEEEEEEEEEEccccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccEEcccccccccHHHHHHHHHHHHEEEEEcc //