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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54913.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  900/915 : Eukaryota  160/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:331 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   4->240 1vplA PDBj 3e-20 28.3 %
:RPS:PDB   1->210 2dwoA PDBj 5e-34 8.2 %
:RPS:PDB   194->226 2b8tD PDBj 5e-08 6.1 %
:RPS:SCOP  3->222 1b0uA  c.37.1.12 * 1e-33 22.7 %
:HMM:SCOP  8->217 1ii8.1 c.37.1.12 * 2.4e-62 41.3 %
:RPS:PFM   56->164 PF00005 * ABC_tran 1e-05 34.0 %
:HMM:PFM   44->164 PF00005 * ABC_tran 2.9e-21 38.1 113/118  
:HMM:PFM   27->52 PF02367 * UPF0079 0.00057 46.2 26/123  
:BLT:SWISS 4->313 DRRA_STRPE 5e-66 44.3 %
:PROS 136->150|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54913.1 GT:GENE BAD54913.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 54706..55701 GB:FROM 54706 GB:TO 55701 GB:DIRECTION + GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD54913.1 LENGTH 331 SQ:AASEQ MPDAIVAEGLVKRYGKLVALDGLDLTVPEGTVTALLGPNGAGKTTTVRVLTTLLVPDEGRATVAGIDVLRRPQALRSRIGASGQYAAVDEYLTGFENLEMVGRLYHMGVKRSKERARELLERFRLTDAADRPVRGYSGGMRRRLDLAGALVANPPVLFLDEPTTGLDPRARLDLWDVISELVAGGTTLLLTTQYMEEADRLADAIAVIDHGKVIARGTADELKTLVGGDRIELTVETADKLAVAEQVLKPLADGDIHLEPGLRRITVPVSNGSQALVDAIGLLTAGDVQIHDVGLRRPSLDDVFLTLTGREAEQFADDAESGLDTSEGSRR GT:EXON 1|1-331:0| BL:SWS:NREP 1 BL:SWS:REP 4->313|DRRA_STRPE|5e-66|44.3|309/330| PROS 136->150|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 44->55|tttvrvlttllv| SEG 114->125|erarellerfrl| SEG 186->192|ttllltt| BL:PDB:NREP 1 BL:PDB:REP 4->240|1vplA|3e-20|28.3|237/238| RP:PDB:NREP 2 RP:PDB:REP 1->210|2dwoA|5e-34|8.2|194/449| RP:PDB:REP 194->226|2b8tD|5e-08|6.1|33/204| RP:PFM:NREP 1 RP:PFM:REP 56->164|PF00005|1e-05|34.0|106/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 44->164|PF00005|2.9e-21|38.1|113/118|ABC_tran| HM:PFM:REP 27->52|PF02367|0.00057|46.2|26/123|UPF0079| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 3->222|1b0uA|1e-33|22.7|220/258|c.37.1.12| HM:SCP:REP 8->217|1ii8.1|2.4e-62|41.3|208/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 19776 OP:NHOMOORG 1127 OP:PATTERN MMB6EEBCCDCCECEES9IKGHFIQFILLSPG85434565743HN9JKFBUQH5GPFKQFE9B9I-14 BGSD*DIJGGIJMDHGEEE-ES55KpFFFFFFUTRVgyvvIaLjSjQVTKIBaXUBDM44ZagRhdi*y*MGGGGVDE9BSHX42624BBB729365--699579J6GF8111111111111115CA66857CAC7VYYbaAAAYOMKGMEDIGJAA866544JEEJTTOC4A3544576563PLGIHID59IWgggffflnVjjggfiTVWWTUgkhMTVaXJVQTTTTStwFDDDFDDDDDDDDCDEDBBGFDEDaYDEB9ENN77VWHGC9LFBEEOLMLHFJNPOMMLPKMMOMNMHGHHGIIIKJIHGLKLHGGKJLEJWNVSedefhecGdGMVVVJGHHkLLGElHNCAliGPJFSKIGMDMI8B7MELJLLE66554EE***HCPidihVQTPRRMTRQP*-MPkMFnMUhwF2***w*v******op7BBSR*gfdhdNWBBBBBBBBRCD9CPJW221111111-2213222132111111111858757RvqTlbacadcJNLNJaajnROPPHRYczPRdR36ONJTGLHLbVodl*BEF8866EB9997789CC9BJFKQeCEHJJEKNIIM8GDICBFIDFIJKLXXKT366756667535332333332A667CAGHM6KHC896H8DCED9DCBABCACE8DEC2-48CCB------XNXYFVOOPPPOPPRNM-ONOLPPPLPMPRNLMNMMOiqkbaFJBOMMMNOOOOOOMOMMPWJJILMKOB-SSSTTTSTRTTT2166566669999D5ROUEDCHBF66767AAAE567664B677JBJJIJKSLVPSTOPJTRS6552555555CEDHEEFFEHJGHGEEA7977AAA887812AB77679932222323H5842433-2422541221234312222DQK79LQKJM6KB ----GD6-KB2BCI6443413313-32331---3231111-1132233322243132231212-----------------1----1----3142112222--12-2-4E9EAFGNCF97949DARW7R8Z*I3IBPABA9IA8IC9D979IA7t7GF9K7FkBE7P5FCGZ68C55593h31276FB9N2IG54MDHED ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 309-331| PSIPRED ccccEEEEEEEEEEccEEEEEccEEEEEccEEEEEEccccccHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHcEEEEEEccEEEEEccHHHHHHHHcccEEEEEEcccccHHHHHHHHHHcccEEEEEEcccEEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHccHHHcccccccccccccccccc //