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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54937.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  12/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:550 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   312->354 PF04049 * APC8 0.00044 25.6 43/144  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54937.1 GT:GENE BAD54937.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(81927..83579) GB:FROM 81927 GB:TO 83579 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD54937.1 LENGTH 550 SQ:AASEQ MSVTGAFTWLGGARPGAVDEPHERASYLLTGAAVALFALVTGGIVTAAAARAWPLAAAIAVGAVLAAAALLVGRALATPRVGPMPDRFGVAGRATAAVLIGVLVAEAATTLLFTAGVDRVLDEKAHAAAESAPAVRAARAGYERAVADRAALDRTIAEAKAETDRALVTARCEYNPAPQCPPTRITGVPGDGPEHRTAQEMLAEARARLAAAEERVPGLDARVAEAEKSTAAALSDAHTAGDRGVGARWAAMHDHTTDSMGALLPRLATLLACLLLALLPLLLRWWRGVTSVDRHAAARAVIDEADRDAEAAIAVTRANLRAATAELRAEQELTAARLAAEADTAIDRERQRTRIIAAIGGLEIGITEPPRTPIRPAAGQPELPAAPVPREDTAVPETPNLPARAADERPGGGLELPIIGTVPFTDTAARWIRPLVPGFVADAIDTATHPLRTARQAFEEVEEITFTFRRTRKVTVDDSASSRSYPAADPWYAQRVAAAVVDVPVREAAAAQPNPGRAALTTAEPTPALLDRDQSAVSQRQGPPALPPAH GT:EXON 1|1-550:0| TM:NTM 4 TM:REGION 27->49| TM:REGION 57->79| TM:REGION 94->116| TM:REGION 260->282| SEG 47->77|aaaarawplaaaiavgavlaaaallvgrala| SEG 125->140|ahaaaesapavraara| SEG 202->215|laeararlaaaeer| SEG 262->284|allprlatllaclllallplllr| SEG 296->345|aaaravideadrdaeaaiavtranlraataelraeqeltaarlaaeadta| SEG 355->366|iiaaiggleigi| SEG 465->472|tftfrrtr| SEG 493->530|aqrvaaavvdvpvreaaaaqpnpgraalttaeptpall| HM:PFM:NREP 1 HM:PFM:REP 312->354|PF04049|0.00044|25.6|43/144|APC8| OP:NHOMO 12 OP:NHOMOORG 12 OP:PATTERN -------------------------------------------------------------------- ---------------1111-1---1-11111-----1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 369-378, 403-409, 481-485, 533-550| PSIPRED ccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccccEEcccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcEEEEEcccccccccccccHHHHHHHHHHHHHccHHHHHccccccccEEEEcccccHHHHcccHHHHHHccccccccccc //