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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54956.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.55.3f.1.1
:614 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  473->557 1colA  f.1.1.1 * 9e-06 11.7 %
:HMM:SCOP  475->564 1wnsA1 c.55.3.5 * 7.5e-05 22.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54956.1 GT:GENE BAD54956.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 103400..105244 GB:FROM 103400 GB:TO 105244 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD54956.1 LENGTH 614 SQ:AASEQ MAGRVSAVRGRVGGLDHTAYVHSGSGDRDGHDEDGSTGQRSAATAASAGYLDARALIGCRHRLHMDSAHPGALADVTEDAGVRQRREAAAAHRARVRDLLVAAAPEQWVIVDPALRAADRAEATVRACAAGAQRIWGALLPQEPDTGRRGGVEILLRDADRGGYIPVIVVNHKVTDPRRPEPADFHPTTSDPFHWDPQPDPARKLRQQPRDQQRLAHLYRMLQRHGLASPGLLGGVIGLQFDRILVHDVAPLLAEYDRRYADRIAVVRGQVPTVPAKVPECRQCPWWTRGMGGPSCEQWLIQRRDVSLVAPGSRAEVLRAHGVTTIDELADWTGPDPEDWQHGPFDEAVVTARAWLAGAPLVRRFEQVRVRRADVEVDVDLESYQEHGAYLWGTLLDGQYRPFVTWDPLPTEDEGRSFGEFWTWLMTVRAQAHAAGKTFAAYCYSRTAEDKWLYESARRFAGRPGVPTVEQVRAFVDGPEWVDMFQAVTEQFICPNGKGLKKIAPVAGFAWRDPEASGEASMSWYRLAVGYDAAPDLGQRTRLLEYNEDDVRATMTLREWMSPRVPDPHCAALEVPSLADFARRSDLGGAAGAAAAAGPRPAAGSLGRGGTIAT GT:EXON 1|1-614:0| SEG 2->14|agrvsavrgrvgg| SEG 82->104|vrqrreaaaahrarvrdllvaaa| SEG 368->380|vrvrradvevdvd| SEG 582->610|arrsdlggaagaaaaagprpaagslgrgg| RP:SCP:NREP 1 RP:SCP:REP 473->557|1colA|9e-06|11.7|77/197|f.1.1.1| HM:SCP:REP 475->564|1wnsA1|7.5e-05|22.8|79/0|c.55.3.5|1/1|Ribonuclease H-like| OP:NHOMO 19 OP:NHOMOORG 19 OP:PATTERN -------------------------------------------------------------------- -----111111111----------------------1111-----------------------1111----------------------------------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-7, 25-42, 612-614| PSIPRED ccccHHHHHHcccccccEEEEEccccccccccccccccccHHHccccHHHccHHHHcccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEcccccccHHHHHHHHHHHHHccccEEEEcEEcccccccEEcHHHHHEEccccccccEEEEcccEEcccccccHHHHcccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHcccccccccHHEEEccccccccccHHHHHHHHHccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEcccccccEEEEEEEcccccEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHccccEEEHHHHHHccEEccccccHHHHHHHcccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHHHHccccccccHHccccccccccccccccccc //