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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54965.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  332/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.46.1
:118 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->110 3gk5A PDBj 3e-11 34.9 %
:RPS:PDB   4->108 3d1pA PDBj 8e-21 24.3 %
:RPS:SCOP  6->109 1yt8A4  c.46.1.2 * 5e-20 21.4 %
:HMM:SCOP  3->110 1yt8A3 c.46.1.2 * 1.6e-30 34.3 %
:RPS:PFM   27->100 PF00581 * Rhodanese 1e-10 45.9 %
:HMM:PFM   24->102 PF00581 * Rhodanese 1.1e-18 39.2 79/113  
:BLT:SWISS 3->100 YRKF_BACSU 1e-13 35.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54965.1 GT:GENE BAD54965.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 113609..113965 GB:FROM 113609 GB:TO 113965 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD54965.1 LENGTH 118 SQ:AASEQ MTSSEIPSVQVDEVPGAFDTGRPEGAILLDVREDDEWQQGHAPGAVHIPMADVPARTDELDYDAEVYVICRQGGRSIEVVKYLTHIGYEAVHVSGGMVAWQRTGRPLVAEGDRQAKIY GT:EXON 1|1-118:0| BL:SWS:NREP 1 BL:SWS:REP 3->100|YRKF_BACSU|1e-13|35.4|96/185| BL:PDB:NREP 1 BL:PDB:REP 28->110|3gk5A|3e-11|34.9|83/100| RP:PDB:NREP 1 RP:PDB:REP 4->108|3d1pA|8e-21|24.3|103/118| RP:PFM:NREP 1 RP:PFM:REP 27->100|PF00581|1e-10|45.9|74/108|Rhodanese| HM:PFM:NREP 1 HM:PFM:REP 24->102|PF00581|1.1e-18|39.2|79/113|Rhodanese| RP:SCP:NREP 1 RP:SCP:REP 6->109|1yt8A4|5e-20|21.4|103/130|c.46.1.2| HM:SCP:REP 3->110|1yt8A3|1.6e-30|34.3|105/0|c.46.1.2|1/1|Rhodanese/Cell cycle control phosphatase| OP:NHOMO 514 OP:NHOMOORG 341 OP:PATTERN ----------------1------1----------------------1-112-1---------1----- 222112122221111------1---1------21112122-2221111-321334111--312-1212221---------1-2-1111----------------11----------------------------1-22234---13-111---12111------------1------------22-43---363223235331344544113332432444216511111131-11111111111111-11112--1--1--------1---1---2111111---2-----1---1111-------------111---1111---1-1111111-1-1---111111---1--1-11-----------1-1-------------1---------------------------------------------------------1----1-------------1------------------------------------------2222221222211222331222222121--211---1-1--1--1123---1-1111111-1--12----11311-111--111-131--22112--1-------------------------111--1---11--------1------------------3-------1--11-------------------------------1111---111111111111111111---------111111111111---------11112-----1-1---------------------1------------------111--1--11122-111111-1------1-----------------------------------------------------------------11- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 110 STR:RPRED 93.2 SQ:SECSTR #cccccEEccHHHHHHHHHTcTTTTEEEEEcccHHHHHHcccTTcEEccTTTcTTGGGcccTTcEEEEEccccHHHHHHHHHHHTTTcccEEEcTTHHHHHHTTGGGcccc####### DISOP:02AL 1-4, 112-117| PSIPRED ccccccccccHHHHHHHHHHcccccEEEEEcccHHHHHHccccccEEccHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHccccEEEEEccHHHHHHcccccccccccccccc //