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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54971.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  301/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:443 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   210->353 PF03816 * LytR_cpsA_psr 9e-42 53.5 %
:HMM:PFM   210->352 PF03816 * LytR_cpsA_psr 4e-48 45.5 143/148  
:BLT:SWISS 204->369 LYAT_ENTFA 9e-23 39.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54971.1 GT:GENE BAD54971.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(118267..119598) GB:FROM 118267 GB:TO 119598 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD54971.1 LENGTH 443 SQ:AASEQ MMNGDDPRNARTRRVPPPQGRPGMPHQRDPRAADPGHGAPGHRPAPPPRPVEPTKKLYRDAAPHQPLAYSQVPQEPPPRLRRTDYAPTQTPEPFEDPRAHRPPRRHAPPPPPAAPPRRRDPAPRPPRPRRKRHPFRWFLIFLLVLVIGSVAGVIHLDGKLTRIDALAGYADRVGDTPGTNWLLVGSDGRGGLTAEQEQELATGGEVGPERTDTIMLVHIPRSGKTTLVSLPRDSYVSIPGHGRDKLNASFALGGPQLLVQTVEIATGLRIDHYAQIGFAGFANVVDTLGGIEVCLPQAIDDPLAGIDLPAGCQELDGPQALGFVRTRATALADIDRMNNQRLFMSALLEKATSASTLANPFTLWPLASDIARSLKVDEGDHLWDLGRLGWAMRGDTVATTVPVGGFDDVSGSGNVVLWDKNRAGAFFEALADDRQIPDDLLTR GT:EXON 1|1-443:0| BL:SWS:NREP 1 BL:SWS:REP 204->369|LYAT_ENTFA|9e-23|39.0|164/303| SEG 29->50|dpraadpghgapghrpappprp| SEG 97->134|prahrpprrhapppppaapprrrdpaprpprprrkrhp| RP:PFM:NREP 1 RP:PFM:REP 210->353|PF03816|9e-42|53.5|144/145|LytR_cpsA_psr| HM:PFM:NREP 1 HM:PFM:REP 210->352|PF03816|4e-48|45.5|143/148|LytR_cpsA_psr| OP:NHOMO 817 OP:NHOMOORG 303 OP:PATTERN -------------------------------------------------------------------- ---1722222222255544-432244444443333334332546243234442322221133417578A75222211122422--------------------------1--------------------------43334---23122122211221-111122212222-1-----1----2221111-113666665666656666325543666222425433333352433333333333333333435324334223234113333122-1112221111311323333333331111111111111232333333313231222222212112--24445123132211221112211211312---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2----111----- -------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-130, 162-176, 438-440| PSIPRED ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEcccccccHHHHHHccccccccccccEEEEEEEcccccEEEEEEccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEHHHHHHHHHHcccEEEEcccccccccccEEEcccEEEEcHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccEEEEEEcccccccccccccEEEEcHHHHHHHHHHHHcccccHHHHccc //