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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54975.1
DDBJ      :             putative prephenate dehydratase
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  624/915 : Eukaryota  34/199 : Viruses  0/175   --->[See Alignment]
c.94.1d.58.18
:304 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->274 2qmxA PDBj 3e-28 35.5 %
:RPS:PDB   192->269 2dtjA PDBj 1e-09 17.9 %
:RPS:SCOP  3->185 2qmwA1  c.94.1.1 * 2e-31 20.7 %
:RPS:SCOP  197->274 2qmwA2  d.58.18.3 * 7e-15 26.0 %
:HMM:SCOP  180->278 1phzA1 d.58.18.3 * 5.2e-23 43.8 %
:RPS:PFM   4->185 PF00800 * PDT 1e-20 35.2 %
:HMM:PFM   4->185 PF00800 * PDT 1.6e-42 35.2 176/182  
:HMM:PFM   198->263 PF01842 * ACT 1.3e-12 30.8 65/66  
:BLT:SWISS 1->300 PHEA_MYCMM 1e-76 52.0 %
:PROS 225->232|PS00858|PREPHENATE_DEHYDR_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54975.1 GT:GENE BAD54975.1 GT:PRODUCT putative prephenate dehydratase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 121927..122841 GB:FROM 121927 GB:TO 122841 GB:DIRECTION + GB:PRODUCT putative prephenate dehydratase GB:PROTEIN_ID BAD54975.1 LENGTH 304 SQ:AASEQ MPRIAYFGPTGTFTEMALAELESSGHFDGPVERVAAPSQPAALDLIRSGAVEGAVVPIESSIEGSISATLDSLAIGPRLQIVAETELEVSFEILARPGTTLADVRTLAAFPVAAAQVRMWVERTLPQVRMYTSASNAAAAEDVVAGHAEAAVSTALAGQRLGLVALASKVVDYEQAVTRFVLVRRPCVAPPATGADRTSIVLELPNVPGSLMRAFAEFATRGIDLTRIESRPTRTGLGTYRFYLDCVGHIDDAAVAEALKALHRTARIRFLGSWPATSATGTPPPSDEEAAQWLTQLRKGVADL GT:EXON 1|1-304:0| BL:SWS:NREP 1 BL:SWS:REP 1->300|PHEA_MYCMM|1e-76|52.0|300/315| PROS 225->232|PS00858|PREPHENATE_DEHYDR_2|PDOC00671| SEG 134->152|asnaaaaedvvaghaeaav| SEG 275->286|patsatgtppps| BL:PDB:NREP 1 BL:PDB:REP 4->274|2qmxA|3e-28|35.5|259/275| RP:PDB:NREP 1 RP:PDB:REP 192->269|2dtjA|1e-09|17.9|78/164| RP:PFM:NREP 1 RP:PFM:REP 4->185|PF00800|1e-20|35.2|176/181|PDT| HM:PFM:NREP 2 HM:PFM:REP 4->185|PF00800|1.6e-42|35.2|176/182|PDT| HM:PFM:REP 198->263|PF01842|1.3e-12|30.8|65/66|ACT| GO:PFM:NREP 2 GO:PFM GO:0004664|"GO:prephenate dehydratase activity"|PF00800|IPR001086| GO:PFM GO:0009094|"GO:L-phenylalanine biosynthetic process"|PF00800|IPR001086| RP:SCP:NREP 2 RP:SCP:REP 3->185|2qmwA1|2e-31|20.7|174/184|c.94.1.1| RP:SCP:REP 197->274|2qmwA2|7e-15|26.0|77/80|d.58.18.3| HM:SCP:REP 180->278|1phzA1|5.2e-23|43.8|96/97|d.58.18.3|1/1|ACT-like| OP:NHOMO 748 OP:NHOMOORG 696 OP:PATTERN ---1-------------1-1-1111111---1111111111111-111111111-1------11-111 11-1111111111111111-1111111111111111111111111111-111222111--111-11111111-------11111111111-----------1--11-11----------------1111111111111111222111111111111111111111111111111111111111111-111-11111111111111111111111111111111--11111112-------------------11----------------------111-------11111111111111-------------111111111-1--1-----------1-11----1-1--111111111111--11111--1111---1-11-1111111111111111111111111---1--1--111-11111111111111111111----1111111111111111111-----------------------------11111-12221111111211111111111111111111111111111111121111111111111111111111111-1121111111111-11111111111111211----1111111-1-------11-1111---111111111----11111111-11-11---1111------11111111111111111-1111111111111111111111111111111111111111111-11111111----------------1---------11212---1-1-1111--1-1111111111111111111111111111111111111111111111111111111111111111111112-111111--------------------------------------1--1-111111 ------1-------1-----1-1-2-----------------------1-----111-----------------------------1-------1---------11----------------------------------------------------------------------111D111-14343-531121221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 267 STR:RPRED 87.8 SQ:SECSTR ##EEEEEccTTcHHHHHHHHHccTTc#####EEEEEccHHHHHHHHHTTcccEEEEEEEEccccccHHHHHHHHHccTEEEEEEEEEEcccEEEEcccccTTTTccEEEcHHHHHHTHHHHHHHcTTcEEEEcccHHHHHHHHHTTcTTEEEEcHHHHHTTccEEEEEEEEETTTTEEEEEEETccEEEEEEEEccEEEEEEEEEccTTHHHHHHHHHHHTTccccEEEEccccTTTcEEEEEEEEEHHHHHHHHHHTTTTTTTccEEEEEEEE############################## DISOP:02AL 302-304| PSIPRED ccEEEEEcccccHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHccccEEEEEEEEEEEEEEEEEcccccHHHcEEEEEccHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHcccccEEEccHHHHHHHccEEEEcccccccccEEEEEEEcccccccccccccEEEEEEEEcccccHHHHHHHHHHHccccEEEEEEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHcEEEEEEEEccccccccccccHHHHHHHHHHHHcccccc //