[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54987.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  239/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:203 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   13->200 PF01810 * LysE 6.3e-46 38.7 186/192  
:BLT:SWISS 1->47,118->198 Y2008_MYCBO 5e-21 51.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54987.1 GT:GENE BAD54987.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(133840..134451) GB:FROM 133840 GB:TO 134451 GB:DIRECTION - GB:PRODUCT putative transporter GB:PROTEIN_ID BAD54987.1 LENGTH 203 SQ:AASEQ MLTAAVAGFGAGLSLIVAIGAQNAFVLRQGVRGQAVLAVVGICAASDIVLIGLGVAGLGAVVAAWPGALTAVGLAGGVFLLGYGVLAARRALRPDAAALGDSGAAAGSVRAAVVTSLALTWLNPHVYLDTVLLLGSIAADRGSLRWIFGLGAMLASTVWFTGLGYGARLLSPVLARPAAWRVLDALVAVTMVAIGVSLLARTF GT:EXON 1|1-203:0| BL:SWS:NREP 1 BL:SWS:REP 1->47,118->198|Y2008_MYCBO|5e-21|51.9|128/199| TM:NTM 6 TM:REGION 3->25| TM:REGION 36->58| TM:REGION 74->96| TM:REGION 103->125| TM:REGION 133->155| TM:REGION 180->202| SEG 49->116|vliglgvaglgavvaawpgaltavglaggvfllgygvlaarralrpdaaalgdsgaaagsvraavvts| HM:PFM:NREP 1 HM:PFM:REP 13->200|PF01810|6.3e-46|38.7|186/192|LysE| OP:NHOMO 258 OP:NHOMOORG 240 OP:PATTERN -------------------------------------------------------------------- ----1111111---1--21-21---122222-11111111----11-1111-111121----1-1--111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111111-------------111-1111111-1-1--111-111-11--------111---------------------------------------1----11222211111111111111-12111111--1121-11111-111--1----11---------------1-1-11--1111------1------------11------------------------11-11-11--111111-1111111111111---------------111---111-1111--1--1111111111-----------111-----------------1111111---11-1-111111---------------1111111-1-----1--11111111-111------11---------1-------------111111112112211111-1---------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 92-110| PSIPRED cHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcc //