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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54989.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.33.1d.157.1
:511 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   443->499 2zylA PDBj 2e-04 43.8 %
:RPS:PDB   1->273 3bk2A PDBj 2e-08 12.1 %
:RPS:PDB   460->498 2de7E PDBj 2e-09 28.9 %
:RPS:SCOP  6->113 1p9eA  d.157.1.5 * 1e-05 12.0 %
:RPS:SCOP  460->508 3c0dA1  b.33.1.3 * 3e-08 26.5 %
:HMM:SCOP  1->239 1vjnA_ d.157.1.4 * 1.2e-14 21.1 %
:HMM:SCOP  460->498 1vm9A_ b.33.1.1 * 3.8e-08 50.0 %
:RPS:PFM   464->498 PF00355 * Rieske 7e-04 45.7 %
:HMM:PFM   461->503 PF00355 * Rieske 2e-10 32.6 43/97  
:BLT:SWISS 1->237 CMAH_ASTRU 2e-11 30.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54989.1 GT:GENE BAD54989.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(135450..136985) GB:FROM 135450 GB:TO 136985 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD54989.1 LENGTH 511 SQ:AASEQ MQITSVGHAGFHIRTAAGSILCDPWVNPAYFGSWFPFPDNTGLDWDELGNCDFLYVSHLHRDHFDAKNLAEHVNKDATVLLPDYPVPDLRRELEKLGFHKFFETEDSVKHTVTGPGGDLDIMIIALRAPADGPIGDSGLVVSDGETTCFNMNDARPVDMDVLHEAFGHIDIHLLQYSGAIWYPMVYDIPARTKSNFGKQKRQRGMDRARSYIEQVGATWVVPSAGPPVFLDPELRYLNDDRGDEGNIFPDQMVFLEQMRIHGNEGGILMIPGSVADVRGKELDLTHPFDPDRIYGDKAAYIEDMAQRMAPVLAAEKATWAHGEGSLLEPLKELFEPIMAQSDLICDGIGYPVGLVLGEETVVLDFPKRVVRAPIEGEGRYRYGFRIAPELVRTVLRDNEPDWVNTIFLSTRFQAWRIGGYNEFLYTFFKCLTDERIAYADGWFAEAHDDSASTEIAGWEIQRRCPHLKADLSKFGVVEGTTLTCNLHGWQWDLESGRCKTSKGHELRSRKL GT:EXON 1|1-511:0| BL:SWS:NREP 1 BL:SWS:REP 1->237|CMAH_ASTRU|2e-11|30.7|218/653| SEG 352->363|vglvlgeetvvl| BL:PDB:NREP 1 BL:PDB:REP 443->499|2zylA|2e-04|43.8|48/359| RP:PDB:NREP 2 RP:PDB:REP 1->273|3bk2A|2e-08|12.1|273/535| RP:PDB:REP 460->498|2de7E|2e-09|28.9|38/107| RP:PFM:NREP 1 RP:PFM:REP 464->498|PF00355|7e-04|45.7|35/95|Rieske| HM:PFM:NREP 1 HM:PFM:REP 461->503|PF00355|2e-10|32.6|43/97|Rieske| GO:PFM:NREP 3 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00355|IPR017941| GO:PFM GO:0051537|"GO:2 iron, 2 sulfur cluster binding"|PF00355|IPR017941| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00355|IPR017941| RP:SCP:NREP 2 RP:SCP:REP 6->113|1p9eA|1e-05|12.0|108/294|d.157.1.5| RP:SCP:REP 460->508|3c0dA1|3e-08|26.5|49/108|b.33.1.3| HM:SCP:REP 1->239|1vjnA_|1.2e-14|21.1|171/0|d.157.1.4|1/1|Metallo-hydrolase/oxidoreductase| HM:SCP:REP 460->498|1vm9A_|3.8e-08|50.0|38/109|b.33.1.1|1/1|ISP domain| OP:NHOMO 29 OP:NHOMOORG 28 OP:PATTERN -------------------------------------------------------------------1 ----2---------11111-11--1111111111111111--------------------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 336 STR:RPRED 65.8 SQ:SECSTR EEEEcccccEEEEEETTEEEEEcccccccTTTTccEEEEccHHHHHTGGGEEEEEcccccHHHHTTHHHHHHHHccccccEEEEEHHHHHHHHHHHHHTTcccTTcEEEEEcTTcEEEETTTEEEEEEEcccccccEEEEEEETTEEEEEccccccccccTTccccccHHHHHHHHHcccEEEETTTcccccccHHHccccEEEEccTTcHHHHHHHHHHHHHTTcEEEEcHHHHHHHHHHHTTccccccccccTGGGTTccGGGEEEEEccT#########################################################################################################################################################################EEcTTccEEEEE##cc#EEcccTTccccGGGEcEEETTEEEcTTTccEEETTTccEEccccccccE### DISOP:02AL 506-511| PSIPRED cEEEEEEEEEEEEEEccEEEEEccccccccccccccccccccccHHHcccccEEEEcccccccccHHHHHHHHccccEEEEccccHHHHHHHHHHcccccEEEccccEEEEEcccccccccEEEEEccccccccccEEEEEEEccEEEEcccccccHHHHHHHHHccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEccccccEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccHHHccccccEEEEEccEEEEEEccHHHHHcccccccEEEEEEEEcHHHHHHHHcccccccEEEEEEEEcEEEEEEccHHHHHHHHHHHHccccEEEccccEEEccccccEEEEEcEEHHHHccccHHHHHHccEEEccEEEEccccEEEEccccEEEccccccHHcccc //