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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54995.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  805/915 : Eukaryota  98/199 : Viruses  1/175   --->[See Alignment]
a.30.2d.122.1
:541 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   300->512 3dgeA PDBj 8e-21 27.8 %
:RPS:PDB   292->517 3dgeA PDBj 2e-30 26.7 %
:RPS:SCOP  289->362 2c2aA1  a.30.2.1 * 2e-12 25.7 %
:RPS:SCOP  370->531 1bxdA  d.122.1.3 * 6e-19 26.0 %
:HMM:SCOP  279->363 2c2aA1 a.30.2.1 * 6e-16 30.6 %
:HMM:SCOP  363->517 1gkzA2 d.122.1.4 * 1.5e-34 35.3 %
:RPS:PFM   63->165 PF05227 * CHASE3 2e-11 36.9 %
:RPS:PFM   298->362 PF00512 * HisKA 8e-06 35.4 %
:RPS:PFM   409->517 PF02518 * HATPase_c 6e-14 38.1 %
:HMM:PFM   48->183 PF05227 * CHASE3 5e-28 28.9 135/138  
:HMM:PFM   409->518 PF02518 * HATPase_c 1.9e-23 31.1 106/111  
:HMM:PFM   298->363 PF00512 * HisKA 3.4e-14 34.4 64/68  
:HMM:PFM   197->264 PF00672 * HAMP 1.1e-13 29.4 68/70  
:BLT:SWISS 290->517 PHYA_ANASP 3e-59 52.2 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54995.1 GT:GENE BAD54995.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 143034..144659 GB:FROM 143034 GB:TO 144659 GB:DIRECTION + GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD54995.1 LENGTH 541 SQ:AASEQ MKNTDSPLVGRFTAQVWFQLVFALMILVVLLGAVAGAQVIGNTNRVTDRLLEQTLPAAAEAYRLQSTLVNQETGLRGYAIAADPQFLEPYVEGRQEQERAVQRLRELLAGRPDLLADLDLIERTAQQWRTEYADPLAATASPGAARELAANTTVRAKAVFDELRAAFTIQNERLAAAVAADNEALADARFLRNAVLVGMVAVFLLTGTVLTVLLRRLVVHPLAALTQSSLRVANGDFDHHIDGHGPADVAQVAEAVEDMRRRIVTELGSSRSQGTLLQQQKADLDLQAEELRRSNAELEQFAYVASHDLQEPLRKVASFCQLLEKRYGSQLDERGKQYIDFAVDGAKRMQVLINDLLTFSRVGRVSEGAEPVRLDQPLDKALHNLSAMIEENDAEIERPEDLPEIVGEPTLLTMLWQNLIGNAIKFRRPEAAPVVRIESTRVSEADGVLFSVSDNGIGVAAEFAEKVFVIFQRLHARDEYSGTGIGLAVCKKIVEYHGGRIWIDTDYTGGTRICFTLRGAGLTPTTQTPTAVVESAEGANA GT:EXON 1|1-541:0| BL:SWS:NREP 1 BL:SWS:REP 290->517|PHYA_ANASP|3e-59|52.2|224/765| COIL:NAA 33 COIL:NSEG 1 COIL:REGION 271->303| TM:NTM 2 TM:REGION 18->40| TM:REGION 193->214| SEG 23->41|almilvvllgavagaqvig| SEG 171->189|nerlaaavaadnealadar| SEG 200->225|vavflltgtvltvllrrlvvhplaal| SEG 247->258|advaqvaeaved| SEG 276->288|llqqqkadldlqa| BL:PDB:NREP 1 BL:PDB:REP 300->512|3dgeA|8e-21|27.8|212/237| RP:PDB:NREP 1 RP:PDB:REP 292->517|3dgeA|2e-30|26.7|225/237| RP:PFM:NREP 3 RP:PFM:REP 63->165|PF05227|2e-11|36.9|103/138|CHASE3| RP:PFM:REP 298->362|PF00512|8e-06|35.4|65/69|HisKA| RP:PFM:REP 409->517|PF02518|6e-14|38.1|105/112|HATPase_c| HM:PFM:NREP 4 HM:PFM:REP 48->183|PF05227|5e-28|28.9|135/138|CHASE3| HM:PFM:REP 409->518|PF02518|1.9e-23|31.1|106/111|HATPase_c| HM:PFM:REP 298->363|PF00512|3.4e-14|34.4|64/68|HisKA| HM:PFM:REP 197->264|PF00672|1.1e-13|29.4|68/70|HAMP| GO:PFM:NREP 4 GO:PFM GO:0000155|"GO:two-component sensor activity"|PF00512|IPR003661| GO:PFM GO:0007165|"GO:signal transduction"|PF00512|IPR003661| GO:PFM GO:0016020|"GO:membrane"|PF00512|IPR003661| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 2 RP:SCP:REP 289->362|2c2aA1|2e-12|25.7|74/89|a.30.2.1| RP:SCP:REP 370->531|1bxdA|6e-19|26.0|154/161|d.122.1.3| HM:SCP:REP 279->363|2c2aA1|6e-16|30.6|85/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 363->517|1gkzA2|1.5e-34|35.3|150/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 8347 OP:NHOMOORG 931 OP:PATTERN -----------------------1Q5575D8B--11-1222242B-D97JG59--------------3 CHS1633433331255622-2611652222257565313447574121242-375214--21F19126684-------21E561-334RQSC-N--1--93R6DDjebOW--------------2212934242D5VXUQNA59Y-vQcgOOAB988232324GP8Pqu*C232222232222NBA33232A8AHHHHHBDG9HHGGFD6B9977FHJ7C8F4GC666666SK24444444444444433323444344333344433443243443336663212211222222222222211222222222211---11132PABVCCBCBDCD9CA9774796F8932779B3JGGDB7135365632-3A8IPHHD454449AJHGB89FGGDH55555555558-CFKDJJDK6JK4BGGGGGBGNKDE8AEBI936CCBC9O75545544513231*EJ11111111--1111111221121121111-2896445436OEEHLJC9998EDMQDDDC7DKIECICJ159DAKGC69GOOFB4AAF5988E8222222223D9OpMOOBB6bD3*RJIH1sisgnroEFRRfTwyAQ21-11---------------5612633ED5KDIC4NB9DABBEDBCGEEBCCCDCFG--167EA------A6557767776765677-7687886766765667668789685647668879777888888765577775-89999AA68AAA--2256666555558T6G2222121----21117879959231CFFEIFENNRGLGODGKGH1112-11-19CBBACDDDDEGGHHBADCECC9AA3323--w2NNABHG--------3-1-------------------------47143433442T3 ----59--------B35643233534244222233334443443341454343632444343221----2---1-------11111-1-2415351222153267A-6-2------------------------------------------------2-----------------343H1-1-1J-163-81-7243- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- STR:NPRED 253 STR:RPRED 46.8 SQ:SECSTR ################################################################################################################################################################################################################################################################################################HHHcTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTccccccEEEHHHHHHTTHHHHHHTTcEEEEEEcccTTcEEEEcHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccTcEEEEEEEEccccccTTTTTGGGcTTccccccccccccccHHHHHHHHHHHTTcEEEEEEETTTEEEEEEEEEccTTTcccccccccHHHHHHccc DISOP:02AL 1-4, 522-541| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHHHccEEEEEcccccEEEEcHHHHHHHHHHHHHHHHEEcccccEEEEEEEEEEEccccEEEEEEEEccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccEEEEEEEcccEEEEEEEEEccccccccccccccccccccccc //