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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD54997.1
DDBJ      :             putative anti-anti-sigma factor
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.13.2
:121 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   10->113 1auzA PDBj 2e-07 16.3 %
:RPS:SCOP  10->113 1th8B  c.13.2.1 * 3e-08 20.2 %
:HMM:SCOP  10->113 1h4xA_ c.13.2.1 * 9.3e-21 35.6 %
:HMM:PFM   14->111 PF01740 * STAS 1.7e-12 26.5 98/117  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54997.1 GT:GENE BAD54997.1 GT:PRODUCT putative anti-anti-sigma factor GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(145118..145483) GB:FROM 145118 GB:TO 145483 GB:DIRECTION - GB:PRODUCT putative anti-anti-sigma factor GB:PROTEIN_ID BAD54997.1 LENGTH 121 SQ:AASEQ MSGEGASRVLDVQVRSENGTEIVTVHGEVDMASAPQLQAALEDAQRGGNPLVVDMSDVGFLGSAGLSALLVVSEAAQPQRLRVVASDAVRRPIELTALDKLLAVYDTLDAALAEGTGTSAN GT:EXON 1|1-121:0| SEG 58->76|vgflgsaglsallvvseaa| RP:PDB:NREP 1 RP:PDB:REP 10->113|1auzA|2e-07|16.3|104/116| HM:PFM:NREP 1 HM:PFM:REP 14->111|PF01740|1.7e-12|26.5|98/117|STAS| RP:SCP:NREP 1 RP:SCP:REP 10->113|1th8B|3e-08|20.2|104/115|c.13.2.1| HM:SCP:REP 10->113|1h4xA_|9.3e-21|35.6|104/111|c.13.2.1|1/1|Anti-sigma factor antagonist SpoIIaa| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 104 STR:RPRED 86.0 SQ:SECSTR #########ccccEEEETTEEEEcccccccTTHHHHHHHHHHHHcccccEEEEEccccccccTTHHHHHHHHHHHHHHHTccccccTTTTHHHHHHccGGGTcccccGGGTGG######## DISOP:02AL 1-5, 8-10, 113-114, 116-121| PSIPRED ccccccccEEEEEEEEcccEEEEEEEEEEEcccHHHHHHHHHHHHcccccEEEEcccccEEcHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHcHHccccccccHHHHHHHccccccc //