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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55002.1
DDBJ      :             putative cation transporter
Swiss-Prot:             

Homologs  Archaea  60/68 : Bacteria  825/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
b.82.7c.108.1d.220.1d.58.17f.33.1
:750 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->54 2rmlA PDBj 9e-10 56.5 %
:BLT:PDB   249->344 2hc8A PDBj 1e-26 59.4 %
:BLT:PDB   418->693 3a1dB PDBj 2e-29 31.1 %
:RPS:PDB   10->67 2aj0A PDBj 1e-12 25.9 %
:RPS:PDB   247->705 3b8cA PDBj 4e-68 22.0 %
:RPS:SCOP  10->67 1fvqA  d.58.17.1 * 4e-14 27.6 %
:RPS:SCOP  247->341 1iwoA1  b.82.7.1 * 4e-18 27.4 %
:RPS:SCOP  463->570 2b8eA2  d.220.1.1 * 9e-12 25.0 %
:RPS:SCOP  563->750 1iwoA4  f.33.1.1 * 3e-23 8.5 %
:HMM:SCOP  9->81 1mwzA_ d.58.17.1 * 6.6e-19 44.4 %
:HMM:SCOP  243->341 1su4A1 b.82.7.1 * 1.4e-26 41.4 %
:HMM:SCOP  437->690 1nrwA_ c.108.1.10 * 7.2e-48 37.2 %
:RPS:PFM   15->60 PF00403 * HMA 2e-07 61.4 %
:RPS:PFM   248->431 PF00122 * E1-E2_ATPase 1e-27 45.1 %
:RPS:PFM   498->641 PF00702 * Hydrolase 2e-10 37.0 %
:HMM:PFM   214->432 PF00122 * E1-E2_ATPase 2.6e-57 33.8 219/228  
:HMM:PFM   437->654 PF00702 * Hydrolase 5.5e-37 37.8 180/192  
:HMM:PFM   16->73 PF00403 * HMA 2.9e-16 42.9 56/62  
:HMM:PFM   100->182 PF03006 * HlyIII 0.00022 22.5 80/221  
:BLT:SWISS 1->745 CTPA_MYCTU e-148 48.0 %
:PROS 443->449|PS00154|ATPASE_E1_E2
:PROS 17->45|PS01047|HMA_1
:PROS 640->662|PS01229|COF_2
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55002.1 GT:GENE BAD55002.1 GT:PRODUCT putative cation transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(148317..150569) GB:FROM 148317 GB:TO 150569 GB:DIRECTION - GB:PRODUCT putative cation transporter GB:PROTEIN_ID BAD55002.1 LENGTH 750 SQ:AASEQ MTTALNQPVAGRIELEIGGMTCASCANRIEKKLNKLDGVTATVNYATEKARVDFTGDIAPEDLIATVEAAGYTAALPAPATTGEPESARVEADPTAALRTRLLVSAVLTVPVIAMAMVPALQFTNWQWLSLTLAAPVVVWGALPFHRAAWTNLRHGTATMDTLVSMGTLAALGWSLYALFWGTAGTPGMTHPFELTIARTDGTGNIYLEAAAGVTTFILAGRYFEACSKRRAGAALRALLELGAKEVSVLRGGVEQRIPVEQLAVGDRFVVRPGEKIATDGVVVEGSSAVDASMLTGESVPVEVGESDAVVGATVNVGGRLVVRATRIGSDTQLAQIARLVEEAQTGKAQAQRLADRISGIFVPIVIALAVATLGFWLGTGGSVAAAFTAAVAVLIIACPCALGLATPTALMVGTGRGAQLGVLIKGPEILESTRRVDTILLDKTGTVTTGTMTLLDVHAAEGEDADRVLAVAGALEHSSEHPIARAIAEAARARGELAPVRDFANLAGLGVQGTVDGHEVLVGRPRLLAERGHPMPSGLAEAVDAAEQRGGTAVAVGWDGAVRGVLVVADAVKPTSAQAISQFKALGLTPVMVTGDNAAAARTVADQVGIDEVIAEVMPEEKVAAVRRLQEQGRVVAMVGDGVNDAAALAQADLGLAMGTGTDVAIEASDLTLVRGDLRAAVDAIRLSRRTLGTIKANLFWAFAYNVAAIPLAMAGLLNPMLAGAAMAFSSVFVVSNSLRLRRFTATAS GT:EXON 1|1-750:0| BL:SWS:NREP 1 BL:SWS:REP 1->745|CTPA_MYCTU|e-148|48.0|729/761| PROS 443->449|PS00154|ATPASE_E1_E2|PDOC00139| PROS 17->45|PS01047|HMA_1|PDOC00804| PROS 640->662|PS01229|COF_2|PDOC00944| TM:NTM 7 TM:REGION 101->123| TM:REGION 129->151| TM:REGION 160->182| TM:REGION 355->377| TM:REGION 387->409| TM:REGION 694->716| TM:REGION 727->749| SEG 68->86|eaagytaalpapattgepe| SEG 229->246|krragaalrallelgake| SEG 384->394|vaaaftaavav| SEG 441->458|lldktgtvttgtmtlldv| SEG 484->495|iaraiaeaarar| SEG 642->660|dgvndaaalaqadlglamg| BL:PDB:NREP 3 BL:PDB:REP 9->54|2rmlA|9e-10|56.5|46/147| BL:PDB:REP 249->344|2hc8A|1e-26|59.4|96/113| BL:PDB:REP 418->693|3a1dB|2e-29|31.1|270/272| RP:PDB:NREP 2 RP:PDB:REP 10->67|2aj0A|1e-12|25.9|58/71| RP:PDB:REP 247->705|3b8cA|4e-68|22.0|459/833| RP:PFM:NREP 3 RP:PFM:REP 15->60|PF00403|2e-07|61.4|44/62|HMA| RP:PFM:REP 248->431|PF00122|1e-27|45.1|184/236|E1-E2_ATPase| RP:PFM:REP 498->641|PF00702|2e-10|37.0|138/195|Hydrolase| HM:PFM:NREP 4 HM:PFM:REP 214->432|PF00122|2.6e-57|33.8|219/228|E1-E2_ATPase| HM:PFM:REP 437->654|PF00702|5.5e-37|37.8|180/192|Hydrolase| HM:PFM:REP 16->73|PF00403|2.9e-16|42.9|56/62|HMA| HM:PFM:REP 100->182|PF03006|0.00022|22.5|80/221|HlyIII| GO:PFM:NREP 8 GO:PFM GO:0030001|"GO:metal ion transport"|PF00403|IPR006121| GO:PFM GO:0046872|"GO:metal ion binding"|PF00403|IPR006121| GO:PFM GO:0005524|"GO:ATP binding"|PF00122|IPR008250| GO:PFM GO:0006754|"GO:ATP biosynthetic process"|PF00122|IPR008250| GO:PFM GO:0016020|"GO:membrane"|PF00122|IPR008250| GO:PFM GO:0016820|"GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances"|PF00122|IPR008250| GO:PFM GO:0003824|"GO:catalytic activity"|PF00702|IPR005834| GO:PFM GO:0008152|"GO:metabolic process"|PF00702|IPR005834| RP:SCP:NREP 4 RP:SCP:REP 10->67|1fvqA|4e-14|27.6|58/72|d.58.17.1| RP:SCP:REP 247->341|1iwoA1|4e-18|27.4|95/115|b.82.7.1| RP:SCP:REP 463->570|2b8eA2|9e-12|25.0|104/113|d.220.1.1| RP:SCP:REP 563->750|1iwoA4|3e-23|8.5|188/472|f.33.1.1| HM:SCP:REP 9->81|1mwzA_|6.6e-19|44.4|72/0|d.58.17.1|1/1|HMA, heavy metal-associated domain| HM:SCP:REP 243->341|1su4A1|1.4e-26|41.4|99/0|b.82.7.1|1/1|Calcium ATPase, transduction domain A| HM:SCP:REP 437->690|1nrwA_|7.2e-48|37.2|247/0|c.108.1.10|1/1|HAD-like| OP:NHOMO 3832 OP:NHOMOORG 1075 OP:PATTERN 221-21211222232131111112B44322955441-2211124534322332-11--1213322--- 4233223866864544588-8K33E4888886F79C6668232446456221749234112473526485222222224374324324344313-1---415364554441111111111111133124211231-4553411154366944522331121114644DD821111111111112734421-323444444545445444433344446452434585565535433252222333323243338554656256566225554342377842121112222222222222222222222232222552222223356344445464354267723437234333421846332232274344345236337-----8754C93A6483533342443449-6A42D776967-5556549944586C34282655552233333333363112535------------------------------2525133333633433444546645444435685467924CD4454CA783552A5A3443642222222264437323313254534462424344224334365334232232332233332333324-147A444333232242322224242262222722---3316------34333333333334433-3433333324333333333435333324343444444434333333222231-333333333333---31111-456883212111111-11111-11322332234345556856554467645552111-21-16333333333333333211211111----1122432222--------3161111---1-1--1-----2---1111131112111356 -1--432-211-22312442323424433332333333233333333233566633323333222221-3112231212222223211-44321221111112424-2532432425222222145251BS4-85822222122322122321A1642313A23113112912242456m65466B85N59D4397555 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 570 STR:RPRED 76.0 SQ:SECSTR #EEccccccccEEEEEEEccccHHHHHHHHHHHHHcTTEEEEEccccEEEEEEEcccHHHHHHHHTT###################################################################################################################################################################################cccccccccccccTTTTcTTccccccccccccccccccccccccccccTTccccccccccccccccccccccccccccccccTTTTTcTTccccccccccccTTTTTTHHHHHHHHHHHHHHHHHHcTTTTTTTccccTTHHHHHHHHTTTTccccTTTHHHHTTTHHHHHHTTTccccccGGGHHHHTTccccEEEccccccccccccccccccccTTHHHHHHHHHHHccccccccHHHHHHHTTccTTccccccccccccccccccccccccccccGGGTcccccTTTTTHHHHHHHHTTTTcEEEEEcccccccEEEEEcccccHHHHHHHHHHHHTTcccEEEEcccHHHHTHHHHTTTcTccEEcccHHHHHHHHHHHHHTTccccccccccTTHHHHHHccccccccccHHHHGGGcccccccccHHHHTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccccHHHHTTTTTTTcHHHHHHHHHcccccc DISOP:02AL 84-88, 230-242, 340-352, 747-750| PSIPRED cccccccccccEEEEEEEccccHHHHHHHHHHHHccccEEEEEEEcccEEEEEEcccccHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccEEEEEEHHHcccccEEEEccccEEEEcEEEEEcccEEcHHHHccccccEEcccccEEEEEEEEEccEEEEEEEEEccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccHHHHHHHHcccEEEEEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccEEEEcccccccccccEEEEEcHHHHHHccccccHHHHHHHHHHHHccccEEEEEEccEEEEEEEEcccccccHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHccccEEEEcHHHHHHHHHccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccc //