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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55010.1
DDBJ      :             putative ABC transporter permease
Swiss-Prot:             

Homologs  Archaea  55/68 : Bacteria  759/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:305 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  73->290 2r6gG1  f.58.1.1 * 1e-18 11.6 %
:HMM:PFM   112->294 PF00528 * BPD_transp_1 1.3e-23 23.7 173/185  
:BLT:SWISS 64->292 Y1313_MYCBO 8e-76 57.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55010.1 GT:GENE BAD55010.1 GT:PRODUCT putative ABC transporter permease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(159131..160048) GB:FROM 159131 GB:TO 160048 GB:DIRECTION - GB:PRODUCT putative ABC transporter permease GB:PROTEIN_ID BAD55010.1 LENGTH 305 SQ:AASEQ MTEAEIIVAGAPESATGRRALVWRRFLRNKPAVVAAVVLLLLVLASFVLPHFLAFDYLDQDRTALRQPPSPRHPFGTDPIGHDVLAQTLRGAQKSLIIGFCVAIFSTAIAAIAGSVAGLLGGWTDRAIMWLVDLLLVVPSTIVIMLFAPRVKGGGGIVLLVVLLSAFGWMISARIVRGLTMSLREREFVRAARYMGAPTRTVIATHIMPNIASILIIDTTLTVGAAIMAETGLSFLGFGVQPPDVSLGTLIRDGTASALTYPWLFLFSGGFLITVVLCANLIGDGLRDAFDPGAKGARKRKRGKA GT:EXON 1|1-305:0| BL:SWS:NREP 1 BL:SWS:REP 64->292|Y1313_MYCBO|8e-76|57.2|229/291| TM:NTM 6 TM:REGION 33->55| TM:REGION 94->116| TM:REGION 128->150| TM:REGION 158->180| TM:REGION 218->239| TM:REGION 262->284| SEG 32->45|avvaavvllllvla| SEG 151->164|vkggggivllvvll| SEG 293->304|gakgarkrkrgk| HM:PFM:NREP 1 HM:PFM:REP 112->294|PF00528|1.3e-23|23.7|173/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 73->290|2r6gG1|1e-18|11.6|216/284|f.58.1.1| OP:NHOMO 3327 OP:NHOMOORG 820 OP:PATTERN 3341313122222212243322113336415212---1-----113-52-B93-5443213-213-11 1114B442344-4113322-22112A2222224222357816266D84333268632511442385577932222622323-311111--------2--------11--1222222222122221111111111214559511-6A33223332222------32215322--1---------A5433881423666664574546445A76663655324C521222222E5155555555655556333222222331-12111--33111112234333322211112211111112122221222222231122111111C26244434541422222111153133A-111BA631-282-3362164311----112-131GHN--47439-AAAAA998AAL-44B4393DOO1-kPPWJIDWTKONI3-115ACA6AA6CC1111111123322-19--------------------------------1-1CDA9C57777544444559955552566D64A7113342343343C5CR231132242-------111221336122352233331111111211----13111-1-------112212221112-1211553121111161111111111111111111--132-1------77JD3977777777777-7777777777777777775ABAB93255555555555545455877667574-544444443444---11-1-1111111746222-1222221312222222121233233232547255332ABA1----1---255556666656688--1-------------12111111111111115-111211-11-1-1-222--112111133654BDB79212 --------------------------------------------------------------------------------------------------------------------------------------------------------------1----2------1--1---1-------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 6-21, 291-305| PSIPRED ccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccccc //