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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55011.1
DDBJ      :             putative ABC transporter permease
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  783/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:325 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  91->262 3dhwA1  f.58.1.1 * 4e-10 19.3 %
:HMM:PFM   113->323 PF00528 * BPD_transp_1 1.2e-39 34.6 179/185  
:HMM:PFM   97->123 PF04846 * Herpes_pp38 0.00024 44.4 27/63  
:BLT:SWISS 26->324 Y1314_MYCBO 9e-87 55.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55011.1 GT:GENE BAD55011.1 GT:PRODUCT putative ABC transporter permease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(160068..161045) GB:FROM 160068 GB:TO 161045 GB:DIRECTION - GB:PRODUCT putative ABC transporter permease GB:PROTEIN_ID BAD55011.1 LENGTH 325 SQ:AASEQ MIGFLLRRAANYVVLLLLASFLTFAVAGLTFRPLDSLEQRNPRPPQAVIDAKAEQLHLDEPIPQRYLTWVSGAVRGDFGTTLAGQPVSEELGRRIGVSLRLLVIGSVLGTVLGVLIGAAGAIRQYRFSDYFTTIVSLVLLSTPIFLLATLLKYGALEINSLTGQRIFLYTGETSAHRIEGLWPQLLDRLQHLVLPTLALALGGMAGYSRYQRNAMLDVLQSDFIRTARAKGLTRGRALYKHGLRTALIPMATLFAYSLGGLITGATFTEKIFGWHGVGEWLVDAVNAQDIYVVVTVTVFTGLVVLVSGLLSDIVYAILDPRVRVG GT:EXON 1|1-325:0| BL:SWS:NREP 1 BL:SWS:REP 26->324|Y1314_MYCBO|9e-87|55.5|299/325| TM:NTM 5 TM:REGION 12->34| TM:REGION 97->119| TM:REGION 135->157| TM:REGION 244->266| TM:REGION 292->314| SEG 292->311|vvvtvtvftglvvlvsglls| HM:PFM:NREP 2 HM:PFM:REP 113->323|PF00528|1.2e-39|34.6|179/185|BPD_transp_1| HM:PFM:REP 97->123|PF04846|0.00024|44.4|27/63|Herpes_pp38| RP:SCP:NREP 1 RP:SCP:REP 91->262|3dhwA1|4e-10|19.3|150/203|f.58.1.1| OP:NHOMO 3498 OP:NHOMOORG 845 OP:PATTERN 4431313166665553443232113336435212---1-----113-42-D95-54432133314-11 -113D342333-4122222-2211262222224333165715155C8424448A732311552395877942333633323-411111--------2--------11--122222222222222211111111121465852216933223332211---11-322153221-11111-1111A5533991423666664564546445A76663655314B521222222D6155545555555555333122222332-12111--33111112234333333311112211111112222222222222221111211111C36244434541422122111153143A-111BA631-282-3462144411----1121132HGL115854B19AAA9AA7AAL-33C32A4DQO1-hQQVJJDVSLMOK4-115CDA7AA6DF1111111122222219-------------------------------11--CEBCC68888654555559955552567E5397113342343353D5CQ241142242-------111221346122352233331111111211----14111111------112222212212-1211543121111141111111211111121111--13221------76IC3987777777777-7777777777777676775AAABA3366665666556666656876666674-666666656666---11111111111174844412323322423322222121225333233558263432ABA1----1---245566666656688----------------12111111111111116-11111--2112211222-1212211143854BEB89212 -----------------------------------------------------------------------------------------------------------------1--------------------------------------------1----2---------1-----------1--1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 325-326| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccc //