[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55012.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  286/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:276 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->274 1rkqA PDBj 3e-14 31.9 %
:RPS:PDB   10->272 3dnpA PDBj 1e-17 17.4 %
:RPS:SCOP  10->274 1nrwA  c.108.1.10 * 2e-39 24.7 %
:HMM:SCOP  8->275 2b30A1 c.108.1.10 * 1.4e-60 32.6 %
:RPS:PFM   12->271 PF08282 * Hydrolase_3 4e-23 29.6 %
:HMM:PFM   12->271 PF08282 * Hydrolase_3 1.5e-58 30.3 254/254  
:BLT:SWISS 10->274 YCSE_BACSU 6e-14 25.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55012.1 GT:GENE BAD55012.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 161226..162056 GB:FROM 161226 GB:TO 162056 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55012.1 LENGTH 276 SQ:AASEQ MTRLHLPKPKMVATDVDGTLIDHDERVSARTRAAVAALVADGVPFVLATGRPPRWVDPVVEGLGYAPLCVCANGAVIYDSAADKILAGHVLDVATLEWLAEIAEHALPGCGLAAERVGESAHDAATPQFVSSPEYEHAWLNPDDTAVARHEVVDAPAIKMLIRLPGAHSGDMRNALAPLVGDRADITYSTDHGLVELSAPGVTKASGLRTVAQRLGVEPDTLITFGDMPNDVPMLELAGHGVAMANAHAEAIAAANEVTTTNSEDGVARVLERWWG GT:EXON 1|1-276:0| BL:SWS:NREP 1 BL:SWS:REP 10->274|YCSE_BACSU|6e-14|25.8|236/249| SEG 26->40|rvsartraavaalva| SEG 243->255|amanahaeaiaaa| BL:PDB:NREP 1 BL:PDB:REP 10->274|1rkqA|3e-14|31.9|251/271| RP:PDB:NREP 1 RP:PDB:REP 10->272|3dnpA|1e-17|17.4|258/268| RP:PFM:NREP 1 RP:PFM:REP 12->271|PF08282|4e-23|29.6|253/253|Hydrolase_3| HM:PFM:NREP 1 HM:PFM:REP 12->271|PF08282|1.5e-58|30.3|254/254|Hydrolase_3| RP:SCP:NREP 1 RP:SCP:REP 10->274|1nrwA|2e-39|24.7|263/285|c.108.1.10| HM:SCP:REP 8->275|2b30A1|1.4e-60|32.6|264/0|c.108.1.10|1/1|HAD-like| OP:NHOMO 452 OP:NHOMOORG 292 OP:PATTERN -------------------------------------------------------------------- ---1211111112111111-11111111111111111222111121111---231223111124212333------------1-----21---------------------------------------------------------------------------------------------1-1-------12222222222222221222112221-1--2224422211-111111111111111111-311-33131-233111-131111-1-222221121211111111111-------------2333331224---1--------2-2----3111---1-111--11----1--1----1-----------------------1------------------------1-------------------------------------1---1-------------------------------------------1----1-----1111--------1---------------------------1-------------------------------------------1-----------------------------112-------1--------------------------------23---112222222222-2222222222222222221323-----3121112211333313-11-2222--1--------1--------------------121-2-------------------------------------------------111111111-11111------------------------------------------------------------------------ --------2----------------------------------------------------------------------------------------------1----1-------------------------------------------------------------------1-------1-----1-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 272 STR:RPRED 98.6 SQ:SECSTR ##ccccccccEEEEccccccccTTccccHHHHHHHHHHHHTTcEEEEcccccHHHHHHHHHHTTccccEEEGGGTEEEcccTTcccEEccccHHHHHHHHHHHHTcccEEEEEccccEEEcccccccHHHccccccTTTccEEEcccHHHHHHccccccEEEEEccGGGHHHHHHHHHHHcTTEEEEEEETTEEEEEEETTccHHHHHHHHHHHTTccGGEEEEEEccGGGHHHHHHccEEEEETTccHHHHHHccEEcccTTTTHHHHHHHHT## DISOP:02AL 1-6| PSIPRED cccccccccEEEEEEccccEEcccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccccEEEEcccEEEEEccccEEEEEccccHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHHccEEEEEEEccccEEEEEcccccHHHHHHHHHHHHcccHHHEEEEEccccHHHHHHHcccEEEEccccHHHHHHccHHccccccHHHHHHHHHHcc //