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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55014.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  97/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:498 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   167->248 2nsgA PDBj 1e-04 31.6 %
:RPS:PFM   211->301 PF08486 * SpoIID 2e-17 52.9 %
:HMM:PFM   210->302 PF08486 * SpoIID 2.2e-30 50.6 89/96  
:HMM:PFM   370->406 PF08310 * LGFP 3.6e-06 35.1 37/54  
:BLT:SWISS 198->329 Y0569_BRAHW 2e-13 37.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55014.1 GT:GENE BAD55014.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 164570..166066 GB:FROM 164570 GB:TO 166066 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55014.1 LENGTH 498 SQ:AASEQ MQRKRQLDDSDNAGLRRTRRRIRLRIRNRVGPPMVRLRPVLATGGTVLLVGGALAYTKWPVDRAYEPLAGPGHGRGMSQVGAFDSAQEGWLAERILAHYYPGATLGTVPPTTLAVRLMDQDDAVLDAYADAGARVAGRTLEPGQVAHLTPLADGGANVVVTLGCDGDVLWQTSTADPWIYPLDPNPGRPAEEHLTLCNGRAYRGSLGVATEDGAFRTVNRVDVEDYLLGVVPAEVQANWADKGAGEALRAQAVAARSYALAEQRYPYAQTCDTTDCQVYPGTEKEDPRTAAAVDSTAGQVLLRDGHILRSEYSAAPDGGAPADIQTFEVGPRPADLEVARPPADPRTRAAETPSAIDVEYERIGGANSTLGTPLGPEWGLPQNAGTYRLFTNGVIIATPTLGAQVVDFTTLMELIPGTDGLDTLPTETVPTETVPSETVPSETAPSESVPPGTVPPGGAPPVEALPRHPAGLPMPPLADPVVPADVPAPVPPPGAAPA GT:EXON 1|1-498:0| BL:SWS:NREP 1 BL:SWS:REP 198->329|Y0569_BRAHW|2e-13|37.0|127/368| SEG 15->29|lrrtrrrirlrirnr| SEG 40->55|vlatggtvllvggala| SEG 339->353|arppadprtraaetp| SEG 425->443|ptetvptetvpsetvpset| SEG 445->466|psesvppgtvppggappvealp| SEG 473->497|pmppladpvvpadvpapvpppgaap| BL:PDB:NREP 1 BL:PDB:REP 167->248|2nsgA|1e-04|31.6|76/240| RP:PFM:NREP 1 RP:PFM:REP 211->301|PF08486|2e-17|52.9|87/96|SpoIID| HM:PFM:NREP 2 HM:PFM:REP 210->302|PF08486|2.2e-30|50.6|89/96|SpoIID| HM:PFM:REP 370->406|PF08310|3.6e-06|35.1|37/54|LGFP| OP:NHOMO 126 OP:NHOMOORG 97 OP:PATTERN -------------------------------------------------------------------- ---1--------------------------------11111---11----------------2-----------------------------------------------------------------------------------33233331222-2-11223221222-11----1--111-111112--1----------------11111----1-----------11----------------------------------------------------------------------------------------------1----------1-111---1-1--1111-111-1-1111-11--1-11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1--1----1111111-1--1-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 76 STR:RPRED 15.3 SQ:SECSTR ######################################################################################################################################################################HHHHHTccTTGGGcEEEcTTccETTHHHHHHHHHHHHHHHHT####cccccGG##GccHHHHHHHHHHHHHHHHHTTccTTE########################################################################################################################################################################################################################################################## DISOP:02AL 1-13, 433-453, 488-498| PSIPRED ccccccccccccHHHHHHEEEEEEEEcccccccEEEEEEEEEccEEEEEEccEEEEEEcccccEEEccccccccccHHHHHHHHHHHccccHHHHHHHHccccEEEccccccEEEEEcccccEEEcccccccccccEEEEEEcccccEEEEEEEcccEEEEEcccccEEEEEEcccEEEccccEEEEEEccccEEEEccEEccEEEEEEEccccEEEEEEEcHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHEEEcccccccHHHHHHHHHHccEEEEEcccEEEEEEEEcccccEEccccEEEcccccccccccccccccccccccEEEEEEEEHHHHHHHHHHcccEEcHHHcccccccEEEEEEEEEEEEccccccEEEEEEEcHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //